Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05089 ATGAAAGAATCGTGGAGATTCATACTATTCTGCTGCATGGTGATAATTGGAGTGACACACTATCATAGTTTGTCTCGAACCAGCCAAGGGTTGACACTTGAAAAGATGAAGGAATTGTTGAACTGGAATGGTGAAGGAGTTATTGATCCATGTTTTTGGTTTGGAGTGGAATGTTCTCATGGAAATATTGTGGCCTTGCACCAAAGGGATATACCATACAATAGAAAACTTCTACAAACATCAAATTCTGCTAACTCACACAAAACCAAGAGTTTTGATCACAGAGAGAATCCTTCACCTTCATCATCACCAACATCTTCACTAGTTTCTCCATCAGAAAGTCCCTCAAATTCACCATCAACATCATTTTTTCTTCCATCACTATTAACATCACCAGAACTTTCTCCTTCACCATCATCCTCACCTTCACCTTCACCTGTGATATCACCTTCCCCTACAGTTTTATCCAATCCACCACATTCTAGTTGGATTTCAGCACCTTCACCTGCTCCATCTTCAAACCAAATGAATTCACAAAGTTCAAACCAAAAGCATCATTCTGTTGTTATATGGTCAACAGTTGGAGGCTTTTCCTTCCTTATTTTGGTGTCATTCGCAGTTTTCGTTTGCTTCAGAAGTAGTAAGGTTGTAACTGTTAAACCTTGGACCACAGGGTTGAGTGGCCAGCTTCGAAAAGCATTCGTAACAGGTATTCCAAGTCTTAAACGAGGTGAACTTGAAGTAGCTTGTGAATATTTCAGCAACATTATTGGTTCTCTACAAGATGAAACTATCTATAAGGGAACTCTTTCAAGTGGAGTTGAGATAGCCGTTGTATCTTCTGCGGCTACTTCAGCGCAAGACTGGTCGAAGAATATGCAAACTCATTTCCGAAAGAAGATTGAGATGTTATCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGTTATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCGAATGGAACGCTGTTTGAGCATCTACATATTAAAGAAGCAGAAGAGCTAGACTGGGGAATGAGAAAGAGGATAGCTATGGGAATAGCTTACTGTCTAGACCACATGCATCAGCTCACACCACCCATTTCCCTCAGAAACCTTCTATCTTCTTCTATATACCTCACTGAAGATTATGCTGCTAAAATATCAGACCTTAGTTTCTGCACCGACAAAGTCGATATGAAGAAGGGTTCTGAAAAAACTTCAGAAGAAGAAATAAAGGACAATGTTTATAGTTTTGGTGTAATATTGTTTGAGTTGATAACAGGAAAAATTCCATATGCAGTGGAAAATGGCTCTCAAACAGATTGGGCTGCAGAATATATAAGAGGACAACCATTGAGAGAATTGGTGGATACAAGCTTGAACTCTTTGAAAGATGATGAAATTGAGAAATGGTCAGAAGTGATTAACAATTGTGTAGATCCTGATCAAGAAACAAGGCTATCAATGAATGAGATTACATCTAAGTTGAAGGAAATTACTGATATGGGGCCTGATGGAGCAACTCCAAAATCATCCCCTCTTTGGTGGGCTGAAATAGAAATTATGTCTGAGGACATTTGCTAA 1614 0.3891 MKESWRFILFCCMVIIGVTHYHSLSRTSQGLTLEKMKELLNWNGEGVIDPCFWFGVECSHGNIVALHQRDIPYNRKLLQTSNSANSHKTKSFDHRENPSPSSSPTSSLVSPSESPSNSPSTSFFLPSLLTSPELSPSPSSSPSPSPVISPSPTVLSNPPHSSWISAPSPAPSSNQMNSQSSNQKHHSVVIWSTVGGFSFLILVSFAVFVCFRSSKVVTVKPWTTGLSGQLRKAFVTGIPSLKRGELEVACEYFSNIIGSLQDETIYKGTLSSGVEIAVVSSAATSAQDWSKNMQTHFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIKEAEELDWGMRKRIAMGIAYCLDHMHQLTPPISLRNLLSSSIYLTEDYAAKISDLSFCTDKVDMKKGSEKTSEEEIKDNVYSFGVILFELITGKIPYAVENGSQTDWAAEYIRGQPLRELVDTSLNSLKDDEIEKWSEVINNCVDPDQETRLSMNEITSKLKEITDMGPDGATPKSSPLWWAEIEIMSEDIC 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05089 537 MobiDBLite consensus disorder prediction 96 136 - -
Mepo3g05089 537 MobiDBLite consensus disorder prediction 82 180 - -
Mepo3g05089 537 SUPERFAMILY Protein kinase-like (PK-like) 241 506 IPR011009 -
Mepo3g05089 537 MobiDBLite consensus disorder prediction 154 180 - -
Mepo3g05089 537 Gene3D Phosphorylase Kinase; domain 1 228 333 - -
Mepo3g05089 537 PANTHER PROTEIN MALE DISCOVERER 2 79 533 - -
Mepo3g05089 537 MobiDBLite consensus disorder prediction 137 153 - -
Mepo3g05089 537 Gene3D Transferase(Phosphotransferase) domain 1 334 516 - -
Mepo3g05089 537 ProSiteProfiles Protein kinase domain profile. 251 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05089 537 FunFam Inactive receptor-like serine/threonine-protein kinase 225 333 - -
Mepo3g05089 537 Pfam Protein tyrosine and serine/threonine kinase 258 506 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05089 Mepo-Chr3 63740222 63745605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05089 282 509 Receptor kinase-like Gene Family AT5G49780 33.597 2.90e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mepo3g05089 PK_Tyr_Ser-Thr 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05089 - - gmx:100814122 587.415