Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05074 ATGAAGGGCATCCCAAAGAGAATGATTGGTACAAACATGTTGCACACAGAAGAGGGACCTGGGCCTAAGAAATCAAACATGGTTAGACCCTTCTCACATGGATCATCATCAGCATTTCGACCATGGCAACCCTCTTGGAAGAGCATTGGCCTCGGTAAACAAGAGGCAAGTAGCAGTGGAGTAAAAGCAACTCCACAAGACAACAAAAGTAATAACATTAGTGTACCAAAATCTAATCTTGGTCATGTTGAGAAGAACCAGATCAGTGGTGGTAGTGCATCTGCATGTGTTGTTGTTGGTGATCAAGCAACACAAAAATTGGATCCAAAGAGGCTCAAACGGATCCAAGCAAATCGAACTTCTGCGCAGAAATCGAGATTGAAAAAGCTCGATTATATTGCCGATTTGGAACAATTGGAAACATATTTGCAGGCTGAGTTATCTTTCCTTCGCACACAAGTTGAAGTCTACAAAAATCAGCAGTGGTTGTTGACTATGGAACACCACCAATTAAGACTTCAAGTGGCTGTACGAGAAAAAGAAAGGATACTTCAAGAAGTGGAGATTGAGAATAAGAGAGCTGAGGTGAATTGGTTGAGGGAGCTTGAGAAGAAACTTGTTGCTGAAGCAAAAAACAAGAGCTCACATTGGAGAAGAAGCATCAAGGATAATGCAAACTGA 681 0.417 MKGIPKRMIGTNMLHTEEGPGPKKSNMVRPFSHGSSSAFRPWQPSWKSIGLGKQEASSSGVKATPQDNKSNNISVPKSNLGHVEKNQISGGSASACVVVGDQATQKLDPKRLKRIQANRTSAQKSRLKKLDYIADLEQLETYLQAELSFLRTQVEVYKNQQWLLTMEHHQLRLQVAVREKERILQEVEIENKRAEVNWLRELEKKLVAEAKNKSSHWRRSIKDNAN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05074 226 CDD bZIP_plant_RF2 111 161 IPR044759 GO:0003700|GO:0006355
Mepo3g05074 226 Pfam bZIP transcription factor 110 160 IPR004827 GO:0003700|GO:0006355
Mepo3g05074 226 Coils Coil 166 197 - -
Mepo3g05074 226 MobiDBLite consensus disorder prediction 29 43 - -
Mepo3g05074 226 MobiDBLite consensus disorder prediction 50 78 - -
Mepo3g05074 226 Gene3D - 109 176 - -
Mepo3g05074 226 PANTHER BASIC LEUCINE ZIPPER 34 44 215 - -
Mepo3g05074 226 SMART brlzneu 106 170 IPR004827 GO:0003700|GO:0006355
Mepo3g05074 226 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 108 160 IPR004827 GO:0003700|GO:0006355
Mepo3g05074 226 MobiDBLite consensus disorder prediction 1 78 - -
Mepo3g05074 226 SUPERFAMILY Leucine zipper domain 110 164 IPR046347 GO:0003700|GO:0006355
Mepo3g05074 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 113 128 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05074 Mepo-Chr3 63606851 63609397 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05074 100 186 bZIP Transcription Factor Family AT2G42380 42.045 1.26e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g05074 bZIP_1 8.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05074 - - mtr:112420191 311.997