Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05067 ATGGCAAACAGAAAAAACAATCCAAATATGGAAACGTTTAAACTTAATGATGATGATGCCATTGACCCAAATTTTTTCAACATGAGTAACCCTACACTAAATGATATATACATGAATAACAATAACAATGGACCCACAAATTTGTCCCAACAAAATCATCATTCCAATTTGAGCAACCGCAATCCAACCAATTTGTCCATTAATAGCAATAATGGACCCCACCAAAATTACCATGGACTTGGAATACTTCAACGAGGGCAACAAAGTAGTAATTTCAATGGTCACTTTTCCAATCCACTATCCCAACAAAATTACCATGGACTTGGAATACTTCTACAAGGATATGGTAGTAATGAACAATTTCACACTACACTTTCCCAACAAAATCACCAGAGTGTGGTTCAACATGGTCATGGTAGTAATATTGGAAATGTCCCATTTAATTCCAATGCAATGCCACAACAGAATGACCATGGCATTCAACATGGAGGGAGTGGTAATTATGATCCATTCAATTACAATTTAGTATCACCAGAAAATTACCATGGCATTCAACATGGACGGGGTGGTAATTATGATCCATTCAATTACAATTTAATATCACCAGAAAATGACCATGGTATTCAACAAGGGCAGGATGGTAATAATGATCTATTTTCCCATGCAATGTCACAACAAAATCATCCTGGTACTCAACATGGACATGGTAGTACTAATGAAACATTTTCTCTTGCAATGGTTCAAAACCAACATGGTCAGCAAAATAATAATGTTTCATTTGGAAATAACTTTGAAGTGGGTGGTTCATCACGAATGAATGAGAATCAACAACAGACCGAAGTGTCGGCACTTGATCAATGGCCACCAGAACAACAACAAAATTCTTCCAGTGGTAGTCAAGTTCTTAGACGAATCATTCACTCTAATGGTTTTCAATATCAAAATCTTGAGATTCATGGAAGCTTGGAGTTGATTGCACATGCAATTCACCATGTGACACCTGTTAATGGGGGCCCAACATTTGATCGAATGATTGATTTTTCTGGGAAAGGCCTTGATGAAATAAAGAACTTCCTGGATCAGTATTGTATGGCACGTCATTCAGCAGGGTACTTTCTTATTGAAGATTCAATGTCTGCGTATTATGAGACTCTTTGCACCGGATATGATTGGATTGATGATATTAATATGGAGGGTCCTATCGATAATTTTTCAGATGAGATAATGGAGCAAGAGCAAGAGCAAGTTGGTGAGATTGGAACACCTGAAAAAAGGAACCTCTCAGAGCAGAGGAAAAGATGTGCACAATTTACATTGGGTGATTTCTGCGATTACTTTCATCTGCCTATGGAAGAAGCAGCGGCTAGAGTGAACATAGCTGCATCAACTCTAAAGAAAATTAGTCGTAGAACAAAATTAAGAAGATGGCCACACAGAAAGGTGAAATGTCTTTTGAGGCAAATAGCAATACTTCAAAATCAATTGGACAGGCAAGATCCGGCGACAAGGGAAAGGACTGAAGAGGAAATTGAAAAGCTTAAACGTGAAATGATTGCAGATTGTGGCGGACATACACCAACTGCGTTGAATTATGTCGCCAACTTCTTGCCGCCGCAGCCGCAGCAGCAGCAGTAG 1635 0.3853 MANRKNNPNMETFKLNDDDAIDPNFFNMSNPTLNDIYMNNNNNGPTNLSQQNHHSNLSNRNPTNLSINSNNGPHQNYHGLGILQRGQQSSNFNGHFSNPLSQQNYHGLGILLQGYGSNEQFHTTLSQQNHQSVVQHGHGSNIGNVPFNSNAMPQQNDHGIQHGGSGNYDPFNYNLVSPENYHGIQHGRGGNYDPFNYNLISPENDHGIQQGQDGNNDLFSHAMSQQNHPGTQHGHGSTNETFSLAMVQNQHGQQNNNVSFGNNFEVGGSSRMNENQQQTEVSALDQWPPEQQQNSSSGSQVLRRIIHSNGFQYQNLEIHGSLELIAHAIHHVTPVNGGPTFDRMIDFSGKGLDEIKNFLDQYCMARHSAGYFLIEDSMSAYYETLCTGYDWIDDINMEGPIDNFSDEIMEQEQEQVGEIGTPEKRNLSEQRKRCAQFTLGDFCDYFHLPMEEAAARVNIAASTLKKISRRTKLRRWPHRKVKCLLRQIAILQNQLDRQDPATRERTEEEIEKLKREMIADCGGHTPTALNYVANFLPPQPQQQQ 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05067 544 MobiDBLite consensus disorder prediction 36 79 - -
Mepo3g05067 544 ProSiteProfiles RWP-RK domain profile. 418 505 IPR003035 -
Mepo3g05067 544 PANTHER PROTEIN RKD4 267 517 IPR044607 GO:0003700
Mepo3g05067 544 Pfam RWP-RK domain 438 482 IPR003035 -
Mepo3g05067 544 MobiDBLite consensus disorder prediction 253 300 - -
Mepo3g05067 544 MobiDBLite consensus disorder prediction 203 238 - -
Mepo3g05067 544 MobiDBLite consensus disorder prediction 141 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05067 Mepo-Chr3 63518860 63521490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05067 445 521 AtRKD Transcription Factor Family AT5G66990 33.750 1.48e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo3g05067 RWP-RK 6.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05067 - - tpra:123895752 474.937