Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05066 ATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATACGTGTTAATGGGATCTGTCAACATAAGCCAAAGACCAATGGAAGGCACTAGAGACACTGAAATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGAAACCAGACAATCTCATCCTCATGGCCAGGTGCACGATTATAGAATGTCACTATGGAGTGAACACATAGGAAGTGTGGAAGAATGTTTCAAGCAAGCAGAGAGCATTGAACGTGAGAGAAATGATTATGGCCAAGCAATGCTAGTGTCTATGCTAATTCCAACACCATATTCCATAAACCATTCATTCCATGAGGAGGATGTTAATATGTCTTTTGGAAGCATGCAATTACATGGTCTTACTTTGGGTAAAATGATGGATCTAGAAAGTATTCGACATGCTACTACATTTTTTCAATGGGATCCATGA 450 0.3889 MIYVHSKGMIVDDEYVLMGSVNISQRPMEGTRDTEIAMGAYQPNHTWETRQSHPHGQVHDYRMSLWSEHIGSVEECFKQAESIERERNDYGQAMLVSMLIPTPYSINHSFHEEDVNMSFGSMQLHGLTLGKMMDLESIRHATTFFQWDP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05066 149 Pfam Phospholipase D Active site motif 1 23 IPR001736 GO:0003824
Mepo3g05066 149 SUPERFAMILY Phospholipase D/nuclease 2 84 - -
Mepo3g05066 149 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Mepo3g05066 149 PANTHER PHOSPHOLIPASE D 1 86 IPR015679 -
Mepo3g05066 149 Gene3D Endonuclease Chain A 2 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05066 Mepo-Chr3 63501497 63501946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05066 1 88 Phospholipase D Gene Family (Wang group) AT2G42010 67.045 2.40e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05066 K01115 - gmx:100786241 154.836