Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05052 ATGGACGGTTGCCTGACGGATATTAGGAAGACACTTGTGGATAAACTGTTAGACAAGGCAATAGAAAAATCACGCTATTTATTTTGCTTCACGTGCATTGTCAAGGAATTCAATGAAGAAAAGGGTAATTTGGAAGCAGAAAGGGGAACTATAACACAGCTTTTTGACAAGGCAACCCAAAAAGATAAAGATGTTAAGTTTAATGCTCAACGTTGGAAAGAACAGGTTGATAAGCTCATTCAAGAGGACACAGAGAAAGAACAAAGTTGTTTTCTTGGTTTTTGCCCTGATTGTATTTGGAGATATAAAAGGGGAAAGGAGTTGGCATCCAAGATAAAGGAGATTAAAAATTTAAGGGAAGAAAAATTTGAAAACGTTGAAGTCACTCGGTGTCTTCCCGGTGTTGAGCGTCATTCTTCGCAGTATTACATTTCATTTAAAAGCAGAGAGTTGAAGTACATAGAGCTTTTGGATGCACTAAAAGATGATAGTAGCTATATAGTTGGATTGCATGGAATGGGGGGTACTGGTAAAACTACATTGGCAAAAGAAGTAGGTAAGCAACTTAAGACATTGGAGTTTTTCAAATATGTTATCGATACGACAGTGTCATTTAATCTTGATATAAAAAAGATTCAAGATGATATTGCCGGATCCTTAGGATTGGAATGGGGAGACATAAATGAATCAGATCGACCTAAACGATTGTGGAGCAGATTAACCAATAATGATAAAATTCTTGTGATATTGGACGATGTCTGGGAAAATCTCAATTTTGATGAGATAGGGATTCCAAATAGTGATAATCATAACAGATGCAAAGTTCTTGTAACCACACGCTCTCTGTCAGTTTGCAAAAAAATGGCATGTGGAAAGACAATTCAACTAGAGCTCTTAACTGAAGAAGACGCATGGATCATGTTCAAAAAGCATGCTGGTCTAAGCAACATTTCATCCAAAAGTATTCTTGATAAGGGACGCAAAATTGCAATTCAGTGCAAAAGATTACCAGTTGCAATTGCTACTATCGCCAGCAGTTTGAAGGGCCTACATAGTCGCGAAGAGTGGGATGTTGCCTTGAATAGCTTAAAAAAGCCTGTGTCCATGGGCAATGTTGATGATGATTTGGTTGACATTTTTAAATGTTTGAAGTTTAGTTATGATTATCTGAAGGATGAAAAAGCAAAGGGATTATTCCTCTTATGTTCTGCATTCCCTGAAGATCAAGAGATTTCTGTTGAACTTCTAACTAGGCTTGGTATAGGAGTCAACCTTTTTGGGGAAGATTATGACAAATACAATGATGCTCGAAGTCAAGCAATTGTAGCAAAAAACAAACTCCTAAATTCATGTTTACTGTTGGAGACAGAGGAAGGAGATGTGAAAATGCATGATTTGGTTCGTGAAGTAGCCCACTGGATAGCGAATGAAGAGATTCAAGTAGTAAAATTATTTGAAAAAAATAAAAAGTCATTGGTTGAAAGGAGTAAGAATATCAAATATTTGTTCTTCCTTGGAAAACTAATGGATTTATTTTCCTCTAGGTTTGATGGCTGTAAGCTTAAGATTCTAATTGCAAAATCGTCCATGTTTGATTCTAAGGATGTCCCAACTTCACTCTTTGAAAATATGGTAGGGCTTCGAGTTTTGATATTAACATATTCGTATAGTACTGGAGACTCTCCCTCTCTATCATTACCAAAATCAATTCAGTTATTGATGAATATTCGTTCTCTTTTAATTGAAAAAGTCAATTTATTAGGTGACATCTCTGTTTTGGGAACCCTCCAAAGTCTTGAAACTCTTGAATTGGAATCGTGTGAAATTGATGAATTTTCCCCTGAAATTGCAAAGTTGGAGAAACTTAGACTGTTGAGCTTGCGACTGTGTGAAATTAGAAGCAATAATCCATTTGAAGTTATCCAGAGATGCCCATCACTTGAAGAATTGTACTTCTGTGATAGTTACAATGATTTTTGTCAGGAAATAACCTTACCTACATTGGAAAGGTATCTTCTCACTGATGATTTTAGGGATAGGAATGGTTCACCATCAAAAGTTGTGGCTTTAGAAGGAGATCGTTTATCAGAAGCAACATATAAGTATGTGATGAAAACATCATATTCTCTTTATCTGATAGGAATTCAGGGATGGATAAATCTCATGCCAGAGATGGTTCCTATAGTTGAAGGTATGAATGATCTAATTGAGCTTTGTTTAGGAGAAATTTCACAACTACAGTGCCTTGTGGACACTAAAGATACTAAATCTGAGCTACCAATTTTTTTCTCCAAGTTGGTTGTACTAAAGCTCTGGGGTATGGAGAATTTGGAAGAATTGTGGAATGGTCCCATCTCCTTTGACTCAATGAACAATTTAGAGAAGCTATCTATCAAGGAGTGTGAAAACATGCGAAGCTTGTTTAAATGCAGCCTAAACCTTTGCAATCTAAAGACCGTAAAACTAGACCAATGCCCAAAATTGGTTTCTGTTTTTGAACTGTCAACTTCCCAAAGCTTGCCGCTGTTGGAGGAATTGAGAATATTTGATTGTGAGAAATTGGAAAACATAATCACATTTGAAGAATCGGTCGATGGTTATAATGATAACAAGAGTTGCTACTCATTGTTTCCAAAGCTGTAA 2643 0.3628 MDGCLTDIRKTLVDKLLDKAIEKSRYLFCFTCIVKEFNEEKGNLEAERGTITQLFDKATQKDKDVKFNAQRWKEQVDKLIQEDTEKEQSCFLGFCPDCIWRYKRGKELASKIKEIKNLREEKFENVEVTRCLPGVERHSSQYYISFKSRELKYIELLDALKDDSSYIVGLHGMGGTGKTTLAKEVGKQLKTLEFFKYVIDTTVSFNLDIKKIQDDIAGSLGLEWGDINESDRPKRLWSRLTNNDKILVILDDVWENLNFDEIGIPNSDNHNRCKVLVTTRSLSVCKKMACGKTIQLELLTEEDAWIMFKKHAGLSNISSKSILDKGRKIAIQCKRLPVAIATIASSLKGLHSREEWDVALNSLKKPVSMGNVDDDLVDIFKCLKFSYDYLKDEKAKGLFLLCSAFPEDQEISVELLTRLGIGVNLFGEDYDKYNDARSQAIVAKNKLLNSCLLLETEEGDVKMHDLVREVAHWIANEEIQVVKLFEKNKKSLVERSKNIKYLFFLGKLMDLFSSRFDGCKLKILIAKSSMFDSKDVPTSLFENMVGLRVLILTYSYSTGDSPSLSLPKSIQLLMNIRSLLIEKVNLLGDISVLGTLQSLETLELESCEIDEFSPEIAKLEKLRLLSLRLCEIRSNNPFEVIQRCPSLEELYFCDSYNDFCQEITLPTLERYLLTDDFRDRNGSPSKVVALEGDRLSEATYKYVMKTSYSLYLIGIQGWINLMPEMVPIVEGMNDLIELCLGEISQLQCLVDTKDTKSELPIFFSKLVVLKLWGMENLEELWNGPISFDSMNNLEKLSIKECENMRSLFKCSLNLCNLKTVKLDQCPKLVSVFELSTSQSLPLLEELRIFDCEKLENIITFEESVDGYNDNKSCYSLFPKL 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05052 880 Gene3D Ribonuclease Inhibitor 750 866 IPR032675 -
Mepo3g05052 880 FunFam Probable disease resistance protein At1g61300 136 293 - -
Mepo3g05052 880 SUPERFAMILY L domain-like 462 856 - -
Mepo3g05052 880 Gene3D - 298 391 IPR042197 -
Mepo3g05052 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 402 IPR027417 -
Mepo3g05052 880 Pfam NB-ARC domain 156 388 IPR002182 GO:0043531
Mepo3g05052 880 Gene3D - 128 295 IPR027417 -
Mepo3g05052 880 Gene3D Ribonuclease Inhibitor 457 672 IPR032675 -
Mepo3g05052 880 PRINTS Disease resistance protein signature 594 610 - -
Mepo3g05052 880 PRINTS Disease resistance protein signature 333 347 - -
Mepo3g05052 880 PRINTS Disease resistance protein signature 167 182 - -
Mepo3g05052 880 PRINTS Disease resistance protein signature 240 254 - -
Mepo3g05052 880 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05052 Mepo-Chr3 63186274 63188916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05052 168 503 WRKY Transcription Factor Family AT5G45050 25.429 1.17e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05052 - - mtr:25490940 1333.55