Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05039 ATGTCTTGTTCCGTTGCAATTCCAAATTCTCCTATATTCTCTTTCTCTTCCTCTTCACATTACTTCACCAAAAAATGCTCTATCATTTCTTCTTCCTCAGAACCTCTCTCAACCTCTTCTTATTCTTCTTCACACTCCTCTCCGGTTTTGAAGAAAAAGAGACCTGCTAAACTTGATATACCTGTTGCTTCTCTCATTGTTGATCTCCCTCCGGCACTACCATCTCCGTCGGCAGCGAAGGATGTCGTTGAGGTAGAAGAAGTTGGGTTTTCTGTGTATTGTAAGAGAGGAAGCAGGAAGCATATGGAGGATCGTTACTCTGCTTCTCTTGATCTTCATGGACAATCAAAACAGGCTTTTTTTGGCATATTTGATGGACATGGAGGTACAAAAGCTTCGGAATTTGCAGCACATAATTTGGAAAAGAATGTGTTAGAAGAAGTAATCAGAAGAGATGAGAGTGATATTGAGGAAGCAGTGAAACATGGTTACCTCAAAACAGATTCAGATTTCTTGGAAGAGGATCTTAATGGTGGCTCTTGCTGTGTAACAGCATTTATTAGGAATGGCAACCTTGTTGTGTCCAATGCGGGCGATTGTCGCGCTGTCATCAGTAGAGGAGGTGTTGCTGAGGCCTTAACATCTGATCACAAACCTTCAAGGAAAGACGAAAAAGAACGGATTGAAACTCAGGGAGGATATGTCGATATGTGCCGCGGTGTTTGGAGAATCCAAGGATCTCTTGCTGTTTCAAGGAGCATTGGTGACAGACACATGAAACAATATGTGATAGCAGAACCTGAGACCAAAGTTCTCAAAATTGAACCTCATCATGACATTTTAATCTTAGCTTCAGATGGATTATGGGAAAAGGTTAGTAATCAGGAAGCAGTAGACATTGCTGGTCCTTTTTGTGCAGGGAGCAATAGACAAGGATCCTTTCAGGCTTGTAAGAAACTTGTAGATTTATCTGTATCGCGAGGCTCTATCGATGATATAAGTGTTATGATCATCGAACTACAGAACTACGTTTGA 1035 0.4135 MSCSVAIPNSPIFSFSSSSHYFTKKCSIISSSSEPLSTSSYSSSHSSPVLKKKRPAKLDIPVASLIVDLPPALPSPSAAKDVVEVEEVGFSVYCKRGSRKHMEDRYSASLDLHGQSKQAFFGIFDGHGGTKASEFAAHNLEKNVLEEVIRRDESDIEEAVKHGYLKTDSDFLEEDLNGGSCCVTAFIRNGNLVVSNAGDCRAVISRGGVAEALTSDHKPSRKDEKERIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQYVIAEPETKVLKIEPHHDILILASDGLWEKVSNQEAVDIAGPFCAGSNRQGSFQACKKLVDLSVSRGSIDDISVMIIELQNYV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05039 344 Gene3D - 80 344 IPR036457 -
Mepo3g05039 344 PANTHER PROTEIN PHOSPHATASE 2C 47 338 IPR015655 GO:0004722|GO:0006470
Mepo3g05039 344 Pfam Protein phosphatase 2C 90 333 IPR001932 -
Mepo3g05039 344 SMART PP2C_4 82 338 IPR001932 -
Mepo3g05039 344 FunFam probable protein phosphatase 2C 25 82 343 - -
Mepo3g05039 344 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Mepo3g05039 344 ProSiteProfiles PPM-type phosphatase domain profile. 89 340 IPR001932 -
Mepo3g05039 344 SUPERFAMILY PP2C-like 88 342 IPR036457 -
Mepo3g05039 344 CDD PP2Cc 88 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05039 Mepo-Chr3 63020044 63021423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05039 1 344 PP2C-type Phosphatase Gene Family AT2G30020 56.533 6.68e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05039 K17506 - gmx:100818903 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05039 3 63020044 63021423 Mepo3g05039 3 63020044 63021423 ECH
Mepo3g05039 3 63020044 63021423 Mepo7g01822 7 27898039 27900633 ECH
Mepo3g05039 3 63020044 63021423 Mepo7g01822 7 27898039 27900633 PCT