Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05035 ATGGAGGGTTTCGAGACTTCAAAAAACTCGCAATCAAAGCTTCAAATCAATGAAAGGGTTGAGGTGAAGAGTTTTGAAGAGGGGTTTCTGGGATCATGGCATCCAGGGACAGTTATTGAATGCGAGAAGCTGAAGCGTCATGTTCGATATGAGAATATTCTGAATGATAATGGGTTGGGTAATTTTGTGGAGGTAGTGAGTGTTTCAAGTGTTTTGGATGGTGATATCGGGTCATTGAGTAAACGTGGGAGGATTAGGCCAGTACCTCCTTTGGTTGAGTTTGAGAAATGTGAACTTAAGTATGGTTTGTGTGTTGATGTAAATTACCAGGAAGCTTGGTGGGAAGGTGTTGTAAATGATAAGTGTGATGGAATGGAGGAGACGACTGTGTTTTTCCCTGATTTGGGTGATGAAATGAAGGTCGGAATTCAGGAAATGCGGATTACTCAGGATTGGGATGAAGTTACAGAGAAGTGGGAGCCACGAGGGAAATGGTTGCTTTTTGAATTGATTGAGGAGTTGTATCTTCCGGTATCAGTAAGGCAAATTTGGTATGATGTGCGACAAAAAAAGGAATTTTCCGTGATTGGTGACTGGACATTGAATGAGAAGAAGGATTTGTGGAGACACTTGATAATGGAGGTAGTTGGTGACTACTTGGCTGTTACAGTAAAGGAAGTTTTCTCAGCCTTGAAACGTCCGGAGATGGAATCAGGTGAACTATTATCTGAAAAGGAAAAGTTTGAGCAGAAAGAACCTGTTGTTCCTCCGGCTGGAAAGGACTTGCCTAAGTTTCAAAATGAAGTTTCATGCAACGGTGTTGGTGAAGCAGTTTCGGTTGCCATCAATTTTGAGAAAAATCAACACAGATTGTCAACTGATTTAAAGTCAAATAATTCGTGGGAACGTGTAATATTTTCTGAAACTGAATACTGTCCCGATGCTGTTAAGCAATATGCGCTTGCTGCTGACGACAAGGCAACTATGGCATCTTTGAAGGAAAAAGTATGGAAACATCTTGCATATATTGGATGGGAAATTGACATTGACCTGCGTAATAAACATTACAGGTACAAGCCACCCAATGGAATCCATTGCAATAAGAAAGTTTACTACTCACTTAGTGTACTTTGTAAAGCTGAATCCATGATGAACTCTTCTCCGTCCGAAAATGGTCTTGGTATAAGGCATCCTGCCGGTGACTGTCACGTTCCAAATGTACCTCTTAGTCCATCTGAAAAGATTCAGAACCGAGTATCTCCTCTAGTTGTGGGGTCTCCATCTGTTACCGTGGCAGATGAACAAGCTTATTGTCCTCAAGCCATTGTGGAATACCACAAACATGCACTCGAGAAGACCTGCAATCGGGCAGATAAAAGTAAACTTATTTCAAAAGTAAGAAATCATCTGAAAGCAGAAGAATGGATTTTAATTGATCCACCTCCAAATAATAGAAGAAGAGGTGTTTTATACATTTCTCCACAGAAACAGAAATTCTTTTCATTGAATTCAGTATGCAGTTTCTTACTTAAAGAAAGAATTCAGAAATCGACTATTTCTGGCATGCAACCTTTAAATACCTTGACCATTCATGAGGAAAATGTTGATCAGGTATTGAGTGATGATTTATCAAGTAGAGACAGTGTTGCTGCGAATAAGTCAACTGCAAATCGGAAGCGAAAACGCTTGAGGAATTCAGATGGCAGCCTGCCAAAGCGCCGAAGTGATGAATCAACTCTAAGGGTGCCAAAGGCATCTTCCTCTTGCCTTTCACATCATAAACCTTTAAATGTTCTATCTTGGTTGATAGACAGCAACATGTTGTTACCAAGGTCTAAGGTTTTTTGTCGAGCAAAACGTGGGCACCGTGCTGTGATTTCTGGGCGAATTACTCATGAAGGCATCAAGTGTAACTGTTGTTCAAGAATATACAGTCTTGTTTCCTTCCAATTTCATGCTACTGGCGGTAATACCATCAGACCAAGTGCCAGTATCTTTCTGGACGATGGTAGGTCGCTCTTATCTTGCCTGATACAAATAATGCAAGATCACAAGTCTAAGGAGGCTATGATAAAACCACACAACCATTCACGTCAAGGCGAAAACGACTACATTTGTTCCGTTTGCCACTATGGGGGTGAACTTCTTTTGTGTGATCAATGCCCATCTTCATATCATAAGACGTGTCTTGGTCTGGAGGATCTCCCTGATGGTGAATGGTTTTGTCCATCGTGTCGATGCGGGATTTGTAGCCAAAGCAAATTCAACGGGGGTGGTGAGGATGAACATTTCCTTACATGCATTCAGTGTGAACATAAATATCATGTTGCGTGCCTGAAAAGTAGAGATATCAGTAAATCCGGAAGTTACGTGGAAAGCTGGTTCTGCGGAAAAGACTGTGAAAAGTTATATGCAGCCCTTCAAAGTATGTTAGGACAACCAGTTTCAGTGGGTGCGGACAATCTAACATGGACATTAGTGAAGTGTGCCGACTCTGAGAGTTGTGAACTTGATAATAGTAAAAGTGGATTACTGGCAGAAAGTTACAGCAAACTCAACGTCGCTCTTTCATTGATGCATGAATGTTTTGAGCCCTTGAAGGAATCCTCTTCTTGCAGAGATCTGATGGAAAATGTTTTATTCAGCCGATGGTCAGAACTTAATCGAATGAATTTCCGGGGTTTCTATTCCGTACTTCTGGAGAGAAATGAAGATCTGGTCAGTGTAGCAACTATTAGGGTCCTTGGAGATAAGGTCGCTGAAGTACCTCTTGTTGGTACCAGATTTCAGTATCGTCGTCATGGAATGTGTCGCATATTAATGGATGAATTGGAGAAGAAGCTCACGCAATTAGGAGTGGAGCGTCTCGTTTTACCTGCTGTTCCCACTGTGGTAGATACATGGACCGGCGCTTTTGGATTTTCAAAGATGCCAAACTTTGAAAGATCACAATTTCTAAACTATACTTTCCTAGATTTTCCGGGTACCATCATGTGCCAGAAGTTTTTAGCAAATATTCCGTCTCCAAATTCGGTTTTGCCAACTGAGTTCCAACGAAAACAAGATGCTATCTCCGGAAGCAGTAGTGCTAGTAATAAGTCTCCAGTTTCTGAAGTTTACCAAGCAGAAGAGGTAGACAAAAGAGAATCGTTGGATCAACAAATGATGGACACTACTGAATGCAATAATGATACTCCTGGCAGTGCTGTTATTGACTGTGTCATCATGGCGGAGCAACCAATTCCTGAGGATCAACAACATTGCCAGAATGGAACCACTCAAGAGTGCTCCTTTGTAAAGTGGAGTGGACTGGTGTACTCTAGACGAAGGAAGGCGAAAGGGGAACATGAAGCGTAG 3357 0.4161 MEGFETSKNSQSKLQINERVEVKSFEEGFLGSWHPGTVIECEKLKRHVRYENILNDNGLGNFVEVVSVSSVLDGDIGSLSKRGRIRPVPPLVEFEKCELKYGLCVDVNYQEAWWEGVVNDKCDGMEETTVFFPDLGDEMKVGIQEMRITQDWDEVTEKWEPRGKWLLFELIEELYLPVSVRQIWYDVRQKKEFSVIGDWTLNEKKDLWRHLIMEVVGDYLAVTVKEVFSALKRPEMESGELLSEKEKFEQKEPVVPPAGKDLPKFQNEVSCNGVGEAVSVAINFEKNQHRLSTDLKSNNSWERVIFSETEYCPDAVKQYALAADDKATMASLKEKVWKHLAYIGWEIDIDLRNKHYRYKPPNGIHCNKKVYYSLSVLCKAESMMNSSPSENGLGIRHPAGDCHVPNVPLSPSEKIQNRVSPLVVGSPSVTVADEQAYCPQAIVEYHKHALEKTCNRADKSKLISKVRNHLKAEEWILIDPPPNNRRRGVLYISPQKQKFFSLNSVCSFLLKERIQKSTISGMQPLNTLTIHEENVDQVLSDDLSSRDSVAANKSTANRKRKRLRNSDGSLPKRRSDESTLRVPKASSSCLSHHKPLNVLSWLIDSNMLLPRSKVFCRAKRGHRAVISGRITHEGIKCNCCSRIYSLVSFQFHATGGNTIRPSASIFLDDGRSLLSCLIQIMQDHKSKEAMIKPHNHSRQGENDYICSVCHYGGELLLCDQCPSSYHKTCLGLEDLPDGEWFCPSCRCGICSQSKFNGGGEDEHFLTCIQCEHKYHVACLKSRDISKSGSYVESWFCGKDCEKLYAALQSMLGQPVSVGADNLTWTLVKCADSESCELDNSKSGLLAESYSKLNVALSLMHECFEPLKESSSCRDLMENVLFSRWSELNRMNFRGFYSVLLERNEDLVSVATIRVLGDKVAEVPLVGTRFQYRRHGMCRILMDELEKKLTQLGVERLVLPAVPTVVDTWTGAFGFSKMPNFERSQFLNYTFLDFPGTIMCQKFLANIPSPNSVLPTEFQRKQDAISGSSSASNKSPVSEVYQAEEVDKRESLDQQMMDTTECNNDTPGSAVIDCVIMAEQPIPEDQQHCQNGTTQECSFVKWSGLVYSRRRKAKGEHEA 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05035 1118 CDD NAT_SF 897 958 - -
Mepo3g05035 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 748 803 IPR013083 -
Mepo3g05035 1118 ProSiteProfiles Zinc finger PHD-type profile. 703 748 IPR019787 -
Mepo3g05035 1118 Pfam Tify domain binding domain 628 679 IPR032308 -
Mepo3g05035 1118 SMART ring_2 747 796 IPR001841 -
Mepo3g05035 1118 SMART ring_2 706 745 IPR001841 -
Mepo3g05035 1118 CDD PHD2_CHD_II 706 745 - -
Mepo3g05035 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 696 747 IPR013083 -
Mepo3g05035 1118 Pfam Agenet domain 18 90 IPR008395 -
Mepo3g05035 1118 SMART PHD_3 705 746 IPR001965 -
Mepo3g05035 1118 SMART PHD_3 747 801 IPR001965 -
Mepo3g05035 1118 SUPERFAMILY FYVE/PHD zinc finger 686 746 IPR011011 -
Mepo3g05035 1118 MobiDBLite consensus disorder prediction 546 584 - -
Mepo3g05035 1118 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 842 1000 IPR000182 GO:0016747
Mepo3g05035 1118 PANTHER PHD FINGER PROTEIN 12 437 1067 IPR042163 GO:0003714|GO:0045892
Mepo3g05035 1118 SMART agenet_At_2 97 154 IPR014002 -
Mepo3g05035 1118 SMART agenet_At_2 12 71 IPR014002 -
Mepo3g05035 1118 Gene3D - 855 988 - -
Mepo3g05035 1118 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 883 980 IPR016181 -
Mepo3g05035 1118 Pfam PHD-finger 705 747 IPR019787 -
Mepo3g05035 1118 MobiDBLite consensus disorder prediction 561 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05035 Mepo-Chr3 62915371 62922184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05035 23 951 PHD Transcription Factor Family AT5G58610 35.583 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo3g05035 Agenet 5.8e-16 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05035 - - cam:101498411 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05035 3 62915371 62922184 Mepo3g05035 3 62915371 62922184 ECH