Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05012 ATGACACCAACAACACTAACACTCATTTTCTCATTCATTTTCACCATAACCACCGTCAACAGCCTCGGCACCGCCGCCACCACAGCCATCATCAATAACACCTCCACCATCTGCGGCATAGTTGCCGGTAAGCCCTACCAATACATCCAATGCTACCAAAACAAAAAACTCATTCCACCAATACTCCCCAACGTTTCATTTCAGTCCATATCCGGTGGCCGGAGTTTCTTCTGCGGCCTCCGGTCTAATGGACTCAGCCTCCACTGTTGGAACACAAAGACACAAAAGTCTTTTCTCAAACCTAAAAGGGTGTATCATAGTGAAAATGTTCAGTTGAGTGATGTAGCTGTTGGTGATGATCATGTTTGTGCTAGAGAGTTGCACTCTGGTGTGGTAAGGTGTTGGAGAGGTTATGGTGAAACTAATGGATTCAAGTTTCCTTCTCCTGATGAAAATTTTCGGTTTCGATGCATTACTTGTGGTACTGGTTTTTGTTGTGGGATATTGAAGGAGAATAATATAGTTTTTTGTTGGGGTGTAAATGGTAAAAAGGGTGTTGAAAATGAGATTCAGGAACAGTTTAGGAATTTATCAATGTCCACATTGGTTGCTGGTGTGTCACATGTTTGTGGTTTAACTCTTCATGGTGTTTTGGTTTGTAAAGGAGAGAAGAACAATGATTCTGGTAAGTTAAATGTTCCTTTGAATACTGGTTCTGTTTTTTCAGGTCTTGCTTTAGGAAAAGATTTCACATGTGGTATTAGAACAAAGAATGGATTTGTTCTATGTTGGGGTTTTTTTTTTGATAATGATGATGTGAATAATCATGTGATGATGAAAAGTGTTTCTTTTGAGTCAATTGTTGCTGGTTTGGATTTTGTTTGTGGTTTGAGTACTAAAAATTTGTCTCTAATTTGTTGGGGTAATACTAATGTTAATGTTCCATTGGGAATGATTCTTCCTGGTCCATGTGTTACTGATTCATGTAGCACTTGTGGTGTGTATCCAAATTCTGATTTTCTTTGTAATGGTTTTGGAAGCATTTGCTATCATTGTCGAACCGAGTTGCCATTCGCCGTGCCTTTGCTACCACCATCAACATCACCACCTAAGAATCAATCTTCGAAAGGCGATGAAGAAAAAACTAACTTGAATGGTTGGAAATTGATGGCATTTATGATTATTGGATCAGTTGGTGCATTTGCTGGTTTATGTACTATTCTTTATTTTCTTATGATTGGTGCAAGAAAATTGTTAAAGGCGAAAATCGATAATTCTGTTCAACCTACAAGTAGTGAATCTGATGATGCTTATGTTGATATAGCTCCAATGCCTAATATTGGAACAACAACATTAAGATCTTTTTCTAGTAAAAGACATAGTTCAAGTAGATTAAGAAGTGGTTCATCTTCAAAGCAATTAGACAGAACAGAAAATTTCACATTTTGGGAGTTAGTTGCAGCTAGTGACAATTTCTCATTGGGAAATAAAATTGGAGCTGGCAGTTTTGGATGTGTTTACAAAGGGAAGTTATTAGACGGTCGTGAAGTCGCGATTAAAAGAGGCGATACAAGCTTGAAGAAGAAGAAATTCCAAGAGAAAGAAACAGCTTTTGATTCTGAGTTAACATTGTTGTCAAGGCTTCATCATAAGCATTTGGTGAGACTAATTGGTTTTTGTGAGGAGAATGATGAGAGGCTTTTGGTTTATGAGTACATGAGCAATGGATCATTACATGATCATTTGCATGATAAGAATAATGTTGAGAAAAATAGTAGCATTATTAATTCATGGAAAATGAGAATCAAAGTTGCATTAGATGCTGCAAGGGGAATTGAGTACATTCATAACTACGCGGTGCCGCCGATTATTCATAGAGATATTAAATCCTCAAACATACTTCTTGATTCAAAGTGGAATGCTAGGGTTTCCGACTTCGGATTGTCGTTAATTTGGCAAGAAACCGAACAAGATTCGATGTCGAATATAAAAGCGGTCGGAACTGTTGGTTACATAGATCCTGAGTACTATGTTATGAATGTTTTAACAACAAAAAGTGATGTATATGGTTTAGGTGTTGTGATGTTGGAACTTTTGACAGGTAAAAGAGCAGTGTTTAAAACTGAAGGTGGTTCAAGTCCTATTGGTGTTGTGGAATATGCAGGTCCAAAGATAGGTTCAGGAGAGGTGTGGAATTTGTTGGATCATAGAGTTGGAATACCAGAAGTGAATGAAGTTGAGTCTGTTGAGATTATGGCTTATACTGCTATGCATTGTGTGAATTTGGAAGGAAAAGAGAGGCCTAATATGGTTGATGTTGTTGCTAATTTGGAGAGGGCTTTGGCTTTTCTTGAGGGTAGTCCTAGTAGTTTTTCTATGTCTTCATTTTCTGCCACTCTTACATGA 2406 0.3774 MTPTTLTLIFSFIFTITTVNSLGTAATTAIINNTSTICGIVAGKPYQYIQCYQNKKLIPPILPNVSFQSISGGRSFFCGLRSNGLSLHCWNTKTQKSFLKPKRVYHSENVQLSDVAVGDDHVCARELHSGVVRCWRGYGETNGFKFPSPDENFRFRCITCGTGFCCGILKENNIVFCWGVNGKKGVENEIQEQFRNLSMSTLVAGVSHVCGLTLHGVLVCKGEKNNDSGKLNVPLNTGSVFSGLALGKDFTCGIRTKNGFVLCWGFFFDNDDVNNHVMMKSVSFESIVAGLDFVCGLSTKNLSLICWGNTNVNVPLGMILPGPCVTDSCSTCGVYPNSDFLCNGFGSICYHCRTELPFAVPLLPPSTSPPKNQSSKGDEEKTNLNGWKLMAFMIIGSVGAFAGLCTILYFLMIGARKLLKAKIDNSVQPTSSESDDAYVDIAPMPNIGTTTLRSFSSKRHSSSRLRSGSSSKQLDRTENFTFWELVAASDNFSLGNKIGAGSFGCVYKGKLLDGREVAIKRGDTSLKKKKFQEKETAFDSELTLLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLHDHLHDKNNVEKNSSIINSWKMRIKVALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSKWNARVSDFGLSLIWQETEQDSMSNIKAVGTVGYIDPEYYVMNVLTTKSDVYGLGVVMLELLTGKRAVFKTEGGSSPIGVVEYAGPKIGSGEVWNLLDHRVGIPEVNEVESVEIMAYTAMHCVNLEGKERPNMVDVVANLERALAFLEGSPSSFSMSSFSATLT 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05012 801 SMART serkin_6 492 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05012 801 Gene3D Transferase(Phosphotransferase) domain 1 573 786 - -
Mepo3g05012 801 CDD STKc_IRAK 498 779 - -
Mepo3g05012 801 Gene3D Phosphorylase Kinase; domain 1 464 572 - -
Mepo3g05012 801 SUPERFAMILY RCC1/BLIP-II 24 266 IPR009091 -
Mepo3g05012 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mepo3g05012 801 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 789 IPR044815 GO:0004674
Mepo3g05012 801 Pfam Protein kinase domain 494 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05012 801 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Mepo3g05012 801 MobiDBLite consensus disorder prediction 450 470 - -
Mepo3g05012 801 ProSiteProfiles Protein kinase domain profile. 492 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05012 801 Gene3D - 51 316 IPR009091 -
Mepo3g05012 801 FunFam Serine/threonine-protein kinase-like protein CCR4 573 793 - -
Mepo3g05012 801 FunFam Somatic embryogenesis receptor kinase 1 464 572 - -
Mepo3g05012 801 SUPERFAMILY Protein kinase-like (PK-like) 468 777 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05012 Mepo-Chr3 62702535 62704940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05012 5 792 Receptor kinase-like Gene Family AT3G55950 50.680 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mepo3g05012 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05012 - - gmx:100802403 1036.94