Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05000 ATGATTATACCTAGCTTTATGATCCAAGGAGGTGATTTTACACATGGAAACGGAATGGGCGGAGAAACAATTTACGGAGAGAAGTTTGCAGATGAGAACTTCAAGCTAAAGCACACTGGTCCAGGAATGGATGTTGTTTACAAGATTGAAGCTAAAGGAAATCAAAGTGGAACTCCCAAGAGCAAGGTTGTTATTGCTGATAGTGGTGAACTCTCTCATATCTCAACAACGATATGTTGA 240 0.4 MIIPSFMIQGGDFTHGNGMGGETIYGEKFADENFKLKHTGPGMDVVYKIEAKGNQSGTPKSKVVIADSGELSHISTTIC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05000 79 Gene3D - 1 43 IPR029000 -
Mepo3g05000 79 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 65 IPR002130 GO:0000413|GO:0003755
Mepo3g05000 79 SUPERFAMILY Cyclophilin-like 2 71 IPR029000 -
Mepo3g05000 79 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05000 Mepo-Chr3 62585825 62586551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05000 3 43 U-box Gene Family AT5G67530 59.524 2.49e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05000 K01802 - cpap:110823753 122.094