Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04998 ATGGCTGTGGAGTATTCAAAACAGCTGCTTGTAATGGTGGTTGTTGCTCTCCTTTATACAAAAGCAGCAACGCAACCGATGTCACTACCAAACTGTACAGCAAAGTGTGGTTCCGTCACCATTCCCTTCCCATTTGGAACCACCAAAGATTGCTCCCTACACAAAACTTTCCTCATCAATTGCAGCAAAACATTTTCAACTACATCAAACTCAACAAAACATGTACCTTTCTTGTCAAAAACTAACCAAAGGGTCCTCAATATTTCACTTAATGGTGAACTGCGCGTTGCATGGCTAGTTGCCAGTTATTGCTATTCTAAAAATAGCAGAATAGGCCAACCCCAGGTTATCAAGATGCCACATTTTCATGTCTCGCCAACTCGAAACAAGTTGATAGCAGTTGGATGTGACACAATTGGACTAATCGAATCATATGATTCTAAAGGAAACAACTACACCACTGGATGTATGGCTTTGTGCAACAAGCTTAGTGATGTTGTGGCCAATGCACCTTGTTCCGGTACGGGTTGTTGTGAGATTTCACTACCCCAAGGACATGTTTTTAGAAAAGTAGAGTATATTTCTGGTAACAGCCGATTGAACCCATCAGTACATGTCTTCAATCCATGTAGCTATGCGTTATTTGCGGAAAATGGAGCCTACAACTTTGCAATCAAAGACCTCCACAAGTTGAAGAAGAAAGAGTTTCCTGTGTTGTTGGACTGGACAATAGGGAACCAAACGTGCCAGCAAGCGAAGAAGGACCTTTTAAGTTATGCTTGTAAGGCAAACAAAAGTAAATGTTACAGTGCAGCAACCCATAAATCTGGTTACCTTTGCAGATGCTTGGATGGATATTGGGGAAATCCTTACCTCAACCATGGTTGCCACGATGTTGATGAATGCAACGAATCCAATTACTGTTTTAAGGGAGCAAAATGCATCAATCTTGCTGGAAGCTACCATTGTTTATGCCCAAAAGGCTATGAAGGAGACGGGAAGAATAATGCAACAGGATGCAGTCCAAAATCCAGTACCAAATCAAGGAAAGAGTACATATTGGTCATTGCATTGAGTGTCAGTGTAAGCCTCGTAGCACTGCTGATTGGAAGCTTTTATGCATATTTGGCATTCAAGAAAAGAAAGTTCATTGAACTTAAAGAACATTATTTTCAAAAAAATGGTGGCTTACTGTTACAACAACAGATAGGGAGGCATGGAGGATCAACTGAAATAGCTAAAGTCTTCAAAGTTGAGGAGCTAAAAGAAGCAACCAACAATTTCGATGAAGGCAAGATCCTAGGCCAAGGTGGTCAGGGAATTGTTTACAAAGGAGTTTTACAAGATAACAGAATTGTAGCAATAAAAAAGTCCAAAATCAGTGACCCAAACCAGATTGAGTCGTTCATCAATGAAGTGGTCATTCTTTCCCAAATCAACCACAGAAATGTGGTAAATATTTTGGGCTGTTGTTTAGAGACAGAAGTTCCCTTAGTTGTTTATGAATTTATTCCCAATGGTACTTTGTATGACCATCTTCATGATGAAACCCAATCTATAAAGCTTACATGGAAAACAAGGTTAAGAATTTCAAAAGAAACTGCTGGTGTCCTAGCATACTTACACTCTGCTGCTTCTACACCAATCATACATAGAGATATGAAATCTACAAATATACTCTTAGATCACAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATTGTTCCTCTTGATCATAGTCAAATAAACACTCTAGTGCAGGGAACATTAGGGTATCTTGACCCAGAATACTTTCACACAAGCCAATTAACAGAGAAGAGTGATGTTTATAGTTTTGGGGTGGTCCTAGCAGAGCTACTGACAGGAAAGAAGGCATTATGTTTTGGCAGGCAAGAGGTTGATAGAAACCTTGCTGCATACTTTGTTTCTTCAATGAAACAGGATCGGTTACTTCATATTTTGGACAAAAATATGGATGAGGCATATATTGAGCAATTGAAAGAGGTTGCCCATATTGCAGAACAATGTTTAAGGGTGAAGGGCGAGGACAGACCAACCATGAAAGAAGTGGCAATGGAACTTGAGGGAATATTAGTTACTGAAGAGTGTCGTTGGGGAAGTGACAATTTGTCTTCAGAAGAGACTGAAAACATGCTCAAAACAACGCAATCAGTCGAAAATGTTCAAGATGGTATTGGTCGAAGTGATATTAATTATTCTGATTCATATCGCTTGAACCAAATTTCGATATCGATTGGTGGAAGATGA 2277 0.3961 MAVEYSKQLLVMVVVALLYTKAATQPMSLPNCTAKCGSVTIPFPFGTTKDCSLHKTFLINCSKTFSTTSNSTKHVPFLSKTNQRVLNISLNGELRVAWLVASYCYSKNSRIGQPQVIKMPHFHVSPTRNKLIAVGCDTIGLIESYDSKGNNYTTGCMALCNKLSDVVANAPCSGTGCCEISLPQGHVFRKVEYISGNSRLNPSVHVFNPCSYALFAENGAYNFAIKDLHKLKKKEFPVLLDWTIGNQTCQQAKKDLLSYACKANKSKCYSAATHKSGYLCRCLDGYWGNPYLNHGCHDVDECNESNYCFKGAKCINLAGSYHCLCPKGYEGDGKNNATGCSPKSSTKSRKEYILVIALSVSVSLVALLIGSFYAYLAFKKRKFIELKEHYFQKNGGLLLQQQIGRHGGSTEIAKVFKVEELKEATNNFDEGKILGQGGQGIVYKGVLQDNRIVAIKKSKISDPNQIESFINEVVILSQINHRNVVNILGCCLETEVPLVVYEFIPNGTLYDHLHDETQSIKLTWKTRLRISKETAGVLAYLHSAASTPIIHRDMKSTNILLDHNLTAKVSDFGASRIVPLDHSQINTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALCFGRQEVDRNLAAYFVSSMKQDRLLHILDKNMDEAYIEQLKEVAHIAEQCLRVKGEDRPTMKEVAMELEGILVTEECRWGSDNLSSEETENMLKTTQSVENVQDGIGRSDINYSDSYRLNQISISIGGR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04998 758 FunFam Wall-associated receptor kinase 2 504 720 - -
Mepo3g04998 758 Gene3D Laminin 259 335 - -
Mepo3g04998 758 CDD STKc_IRAK 434 700 - -
Mepo3g04998 758 Pfam Wall-associated receptor kinase galacturonan-binding 32 92 IPR025287 GO:0030247
Mepo3g04998 758 Gene3D Phosphorylase Kinase; domain 1 405 503 - -
Mepo3g04998 758 ProSiteProfiles EGF-like domain profile. 298 335 IPR000742 -
Mepo3g04998 758 Pfam Calcium-binding EGF domain 298 335 IPR001881 GO:0005509
Mepo3g04998 758 SMART egf_5 248 297 IPR000742 -
Mepo3g04998 758 SMART egf_5 301 341 IPR000742 -
Mepo3g04998 758 CDD EGF_CA 298 332 - -
Mepo3g04998 758 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 701 IPR045274 GO:0007166
Mepo3g04998 758 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
Mepo3g04998 758 Gene3D Transferase(Phosphotransferase) domain 1 504 721 - -
Mepo3g04998 758 SMART egfca_6 298 341 IPR001881 GO:0005509
Mepo3g04998 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Mepo3g04998 758 FunFam Wall-associated receptor kinase 2 398 503 - -
Mepo3g04998 758 ProSitePatterns Calcium-binding EGF-like domain signature. 298 323 IPR018097 GO:0005509
Mepo3g04998 758 ProSiteProfiles Protein kinase domain profile. 428 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04998 758 SMART serkin_6 428 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04998 758 Pfam Protein tyrosine and serine/threonine kinase 431 697 IPR001245 GO:0004672|GO:0006468
Mepo3g04998 758 SUPERFAMILY Protein kinase-like (PK-like) 413 697 IPR011009 -
Mepo3g04998 758 FunFam Fibrillin 2 293 337 - -
Mepo3g04998 758 SUPERFAMILY EGF/Laminin 298 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04998 Mepo-Chr3 62528401 62538975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04998 9 722 Receptor kinase-like Gene Family AT1G21230 44.979 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mepo3g04998 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04998 - - mtr:25489730 1107.05