Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04973 ATGGCTACTATTGCTACTTTCTTCAACAAATTTTACTATGTTTTGATCCTCATTGTCCACCTTGGATGCTTCATGTTCACAGTCGCCGCCGCGGCCGCCGGAAAACAAGATAACCGTCAATTATTACCATCAAAGAAACGAAAAATCTCACCTTTATCACAACCCTCTTCACCTTCTCACCCAAAATTCAAAACCCATAAAACTCTTTCTTCTTCTTGGCATTTCATCAAACACCTCTTCTGCAAAAATTCATGTAAAACTGTAACCACCACACCCACTACCCAATCATCACCTCAGTCCACCATTACAACCACCGTGAAAGCATCCACACAATCCCTTATCTCATTGGTTCAACCCGACCCGAGTTTCCAAGATCCATCGCGGAAGAAACAATCCGAATCAGATATCTCCGCCGATAACAACCTCTTCTTCCCTCTCCGCAATGATATCTTCCCATGCACCGCGTGCGGCGAGATTTTCCAGAAACCGAACCTCCTCGAGAATCACCAATCCACAAACCATGCTGTATCGGAGCTTATCGGATCCGACCCGGGTCATAACATAGTGCAAATCATCTTCAAATCGGGTTGGCCCGAAACAAACACCTTCCCAAACATACACCGAATCTTGAAGATCCATAACAGCCAGAAAATCCTCTCGAAATTCGAAGAATATCGCGAAACGGTGAAGATTAAGGCAGCGCGTGGTGTCACGCGCCGCCGTGACGAACGCTGCATTGCTGACGGGAATGAGCTCATGCGTTTTCATTGCTCCACTTTTTTATGTGAGTTGGGACATAACGGGGATTCTTCGATTTGTTCTCAGCAATTTTGTAATATTTGTGGAATGATTAAATCAGGATTTTCACCGAAATTAGATGGAATTTCCACGCTGTCGACTAGCTGGAGGGCACACGCGTCAATTCCTGATGACATCGAGCGGGAGTTTAAGTTCATGAACGTCAAACGGGCAATGCTCGTTTGTCGTGTTATTGCGGGTCGGGTTGGGTCAGATTTGGACGATGAGGTGGATAAAACTGATGGAGGTTTTGATTCGGTGATGGCGCGTGGCGAGAGTGGTGTTTACACAAGACTTGATGAGGAGGAGTTGGTTGTTTTTAATCCTAGGGCTGTTCTTCCTTGCTTTGTGATTGTGTATAGTGTGTAA 1167 0.455 MATIATFFNKFYYVLILIVHLGCFMFTVAAAAAGKQDNRQLLPSKKRKISPLSQPSSPSHPKFKTHKTLSSSWHFIKHLFCKNSCKTVTTTPTTQSSPQSTITTTVKASTQSLISLVQPDPSFQDPSRKKQSESDISADNNLFFPLRNDIFPCTACGEIFQKPNLLENHQSTNHAVSELIGSDPGHNIVQIIFKSGWPETNTFPNIHRILKIHNSQKILSKFEEYRETVKIKAARGVTRRRDERCIADGNELMRFHCSTFLCELGHNGDSSICSQQFCNICGMIKSGFSPKLDGISTLSTSWRAHASIPDDIEREFKFMNVKRAMLVCRVIAGRVGSDLDDEVDKTDGGFDSVMARGESGVYTRLDEEELVVFNPRAVLPCFVIVYSV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04973 388 ProSitePatterns Zinc finger C2H2 type domain signature. 153 174 IPR013087 -
Mepo3g04973 388 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 179 IPR013087 -
Mepo3g04973 388 MobiDBLite consensus disorder prediction 47 65 - -
Mepo3g04973 388 SUPERFAMILY ADP-ribosylation 176 387 - -
Mepo3g04973 388 Gene3D - 179 387 - -
Mepo3g04973 388 MobiDBLite consensus disorder prediction 43 65 - -
Mepo3g04973 388 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 71 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04973 Mepo-Chr3 62189522 62191408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04973 73 388 C2H2 Transcription Factor Family AT2G29660 55.015 5.35e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g04973 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04973 - - gmx:100785244 582.793