Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04936 ATGAAGAAACCATCAAGCCCAAACTTGCATCAATCTAACCAAAGAAGAAAGAAAGTTGGTCACAAAAGTGGCAGTGCAAGCAATATCAATGGCACAAATAAGAACAATCATGAGCATAATCATAGTACTATGACATATTTCAAGTCTGTTTTCAAAAGCCTTTTTGCATTGATAACAAAAACAACCTCAGAAGCTGTTGAAAATGATTCCTCAAGGAATAAAGTCAGAGGAGTATCATCTTCAACAGATGTATCATCTGATAGTTCAAAGAGTTCATCAAAATGGAAAACTTCTCAATCTTCAACACCAACTAGCACTTCAAGAAGTCAGCTTGGAATGGGAAATTTCTCATTTGAGGAACTTTATAAGGCAACAGGAAAATTCTCTCCAGATAATAAGATTGGTGAAGGGGCTTTTGGAATTGTATATAAGGGAAAGCTTTATGATGGATCTCTTGTGGCTGTAAAGTGTGCCAGGAAGGATGTACAAAAGAAACACTTGGCTGAGTTCAAGAATGAAATAAACACCTTGTCAAAAATTGAGCATCTGAATCTTGTGAGGTGGTATGGATATTTGGAGCATGGAGATGATAAGATTATTGTTATTGAATATGTAAATAATGGAACTCTCAGGGAACATTTAGATGGTGTGAGGGGCAATGGACTAGAAATTAGTGAGCGTCTAGACATAGCGATCGATGTAGCTCATGCAATTACATACCTTCATATGTACACAGATCATCCAATCATTCACAGAGACATCAAAGCATCAAATATCTTAATAACAGACAGTCTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCAAGGTTGGCTCCAGAAGACCCTAATGCGACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGTTACTTGGATCCTGATTATATGAGAACACGCCAACTCTCCGAAAAGAGTGATGTTTATTCCTTTGGTGTGTTACTTGTTGAAATCATGACAGGAAGACATCCAGTTGAACCAAAGAAAGCCCTCAATGAAAGAGTTACAATTAAATGGGCTATGCAGTTATTGAAACAAGGAGAAGCTGTGATTGCAATGGATCCAAGGCTTAGGAGAAGTTCAGCCTCAAACAAAGCTGTACAAAAGGTTCTTAAGCTTGCTTTTCAATGTCTTGCACCTGTGAGACGATTGCGGCCATCAATGAAGAATTGTCAAGAGGTTCTATGGGAAATCCGGAAAGAGTTTAGAGACAGAATCTCTTCTCGTCCTCCTCCCATTGGTTCTCACCATTCTTCAGACTTTCCTCAGACAGATTCTAGAAAGAATCGACATAAGACATTTGGTGTTGCAGACAAGAGACCTCAATTTGTCTCAGCATAA 1359 0.3856 MKKPSSPNLHQSNQRRKKVGHKSGSASNINGTNKNNHEHNHSTMTYFKSVFKSLFALITKTTSEAVENDSSRNKVRGVSSSTDVSSDSSKSSSKWKTSQSSTPTSTSRSQLGMGNFSFEELYKATGKFSPDNKIGEGAFGIVYKGKLYDGSLVAVKCARKDVQKKHLAEFKNEINTLSKIEHLNLVRWYGYLEHGDDKIIVIEYVNNGTLREHLDGVRGNGLEISERLDIAIDVAHAITYLHMYTDHPIIHRDIKASNILITDSLRAKVADFGFARLAPEDPNATHISTQVKGTAGYLDPDYMRTRQLSEKSDVYSFGVLLVEIMTGRHPVEPKKALNERVTIKWAMQLLKQGEAVIAMDPRLRRSSASNKAVQKVLKLAFQCLAPVRRLRPSMKNCQEVLWEIRKEFRDRISSRPPPIGSHHSSDFPQTDSRKNRHKTFGVADKRPQFVSA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04936 452 ProSitePatterns Protein kinases ATP-binding region signature. 134 160 IPR017441 GO:0005524
Mepo3g04936 452 MobiDBLite consensus disorder prediction 23 40 - -
Mepo3g04936 452 Gene3D Phosphorylase Kinase; domain 1 86 204 - -
Mepo3g04936 452 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 205 415 - -
Mepo3g04936 452 Gene3D Transferase(Phosphotransferase) domain 1 205 416 - -
Mepo3g04936 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mepo3g04936 452 SMART serkin_6 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04936 452 SUPERFAMILY Protein kinase-like (PK-like) 103 404 IPR011009 -
Mepo3g04936 452 ProSiteProfiles Protein kinase domain profile. 128 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04936 452 MobiDBLite consensus disorder prediction 427 443 - -
Mepo3g04936 452 MobiDBLite consensus disorder prediction 65 111 - -
Mepo3g04936 452 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 92 204 - -
Mepo3g04936 452 MobiDBLite consensus disorder prediction 412 452 - -
Mepo3g04936 452 PANTHER OS01G0750732 PROTEIN 4 409 - -
Mepo3g04936 452 Pfam Protein tyrosine and serine/threonine kinase 131 401 IPR001245 GO:0004672|GO:0006468
Mepo3g04936 452 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04936 Mepo-Chr3 61714264 61717353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04936 123 404 Receptor kinase-like Gene Family AT5G59700 43.262 5.42e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mepo3g04936 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04936 - - gmx:100819818 628.632