Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04929 ATGGTGGCCATTGAAGAGTTATCGGAGCTCGCTGATTCCATGTGTCAAGCTTTGACGCTTCTCGCTGATGAAGATATGGATGAAAATTCGAATTCTAGAAGAACTTCCACTTTCCTCAACGTCGTCGCTCTCGGCAAAGTCATAAGTCTTCATTTATCCTCATATTCATTGCAGTATAGGTTGAGTATGGCTTCCTCGGCCAAGCCTCGAGATCCGATAAAATTGGTTTTACACACGAGTATAGCTTTGCAATCAAATATGTTCATATCAAATTTAATGTCCTTATTGGTTGTTTTGGATGAATGGAAGCTATTCGAGAAGAGGCCGAAGCAATTTGGAATGGGAGGTGCATTGCTGATGAAGAGGGATTTGACCAGATTCGACAAGTGGCCGAAGACTGTTCAGATTCAAAGGAAGAATAGGATTTTGAAGCAGAGATTGAAGGTTCCATCAGCCCTGAACCAGTTCACTAAGACCCTCGACAAAAATCTAGGTCAAAAATTAACTATTGAAATGTTTGTTCTGATTTTACCTTGA 537 0.4078 MVAIEELSELADSMCQALTLLADEDMDENSNSRRTSTFLNVVALGKVISLHLSSYSLQYRLSMASSAKPRDPIKLVLHTSIALQSNMFISNLMSLLVVLDEWKLFEKRPKQFGMGGALLMKRDLTRFDKWPKTVQIQRKNRILKQRLKVPSALNQFTKTLDKNLGQKLTIEMFVLILP 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04929 178 PRINTS Ribosomal protein L7A family signature 126 143 IPR001921 -
Mepo3g04929 178 PRINTS Ribosomal protein L7A family signature 109 126 IPR001921 -
Mepo3g04929 178 PRINTS Ribosomal protein L7A family signature 146 165 IPR001921 -
Mepo3g04929 178 Gene3D - 130 172 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04929 Mepo-Chr3 61639334 61641806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04929 104 168 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 72.308 1.29e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04929 K02936 - mnt:21394091 112.079