Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04904 ATGAACATGCTTGGTTTACATGATTCTGAAAAACTCATCTCCCATGAAAAAAAGTTTACTGCTTATGATGATGATCTCTATAAGTTCTATCATCTTGAAGAGTCTCAGATTAGGGCCAACTCAAAAGGGTTTAAGGTAGATTTTCAAATGAGAAAGAATGTTGTAGATTGGTTAATACAAACACACTATGAACAAAAACTCATGCCAGAAACCCTTTATCTTTGTGTCAACATACTCGATCGTGTTCTTTCGAAAATCAAGTTTGATGTGACGACTATGGATAAACTTAAACTCATCGGTCTCTCCTCATTGTTGTTGGCTTCCAAGTATGAACAAAGAAGTGCTGTTGGTGTTTACGATGCTGAATACATGGCTGATTATATTTATATGCCAGAAGAAATATGTCAAATGGAGAAGCTTATCCTACAAGAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTGTTGTTAGAAACATAAGGGCGTGTCTTTTATCCGATGAAGACAAGATCATGGAGAACATGGTGTTTTTCTTTTCTGAGCTCAGCTTGACAAATCATTCCATTGTGTGCGACTATAAGCCTTCAGTGATTGCTGCTTGTTCCGTGTATTGTGCAAGGTTTGTTATTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATGTGTACGGGGTACTCTGAGGACAAGTTATTGTCTTGTGCCAGTGTTATGATGAAGTTGTGCAGTCAAATTTGTGGAGATGGAATCATGGAAGTTTTTAAGAAATTTTCAAGTTTATATCAATCTAGGGTTTCATGTATAGCTCAAGAATTTCTCGAAGTTTAA 834 0.3633 MNMLGLHDSEKLISHEKKFTAYDDDLYKFYHLEESQIRANSKGFKVDFQMRKNVVDWLIQTHYEQKLMPETLYLCVNILDRVLSKIKFDVTTMDKLKLIGLSSLLLASKYEQRSAVGVYDAEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFVVRNIRACLLSDEDKIMENMVFFFSELSLTNHSIVCDYKPSVIAACSVYCARFVIERYPFWSNDLKMCTGYSEDKLLSCASVMMKLCSQICGDGIMEVFKKFSSLYQSRVSCIAQEFLEV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04904 277 SMART Cyclin_C_2 152 273 IPR004367 -
Mepo3g04904 277 SUPERFAMILY Cyclin-like 19 147 IPR036915 -
Mepo3g04904 277 Pfam Cyclin, C-terminal domain 152 269 IPR004367 -
Mepo3g04904 277 SMART cyclin_7 56 143 IPR013763 -
Mepo3g04904 277 SMART cyclin_7 156 242 IPR013763 -
Mepo3g04904 277 ProSitePatterns Cyclins signature. 51 82 IPR006671 -
Mepo3g04904 277 Gene3D - 40 144 - -
Mepo3g04904 277 Pfam Cyclin, N-terminal domain 26 149 IPR006671 -
Mepo3g04904 277 SUPERFAMILY Cyclin-like 153 272 IPR036915 -
Mepo3g04904 277 Gene3D - 145 276 - -
Mepo3g04904 277 PANTHER CYCLINS 15 242 IPR039361 -
Mepo3g04904 277 PIRSF Cyclin_A_B_D_E 8 276 IPR046965 GO:0016538|GO:0044772
Mepo3g04904 277 FunFam G2/mitotic-specific cyclin 36 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04904 Mepo-Chr3 61157077 61157910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04904 22 270 Core Cell Cycle Gene Families AT2G26760 38.095 1.23e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04904 K21777 - pvy:116130998 200.675