Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04873 ATGACGGCAACACTCAGCCTCGCCGGTATCCCCACCGTCCGGCCACTTCGTTTCTCCGACGACTGTTCCACCTCCGCAAGATTCCTTGGGAAACCTAGTTCCAATATTTCAAATCGGCGCCGGATTTCAATCCGAGCAGTAACGGCGGCAGTCGAGACACGGAGGCCGGCGAGTAGCTTATACGAAGTTTTACGATTAAATCCAGGCGCATCAGCGACGGAGATTAAATCGGCTTACCGGAGTCTTGCTAAGGTTTACCATCCCGATGCGGCGGCGCGACGGTTACCGGAGTGTGACGACGGTGACTTCATCGAGATCCGTAACGCTTATGAAACTCTATCTGATCCATCGGCGAGACAGATTTACGATCTGTCGTTAATGGCGCACGGCGGAAGAAACAGGCGGTTTACGGCGGCGCCGGTGACGCAGAAGCGGAATTCTGGCTATTATACGAATCGGAGATGGGAAACGGATCAATGCTGGTAG 486 0.5412 MTATLSLAGIPTVRPLRFSDDCSTSARFLGKPSSNISNRRRISIRAVTAAVETRRPASSLYEVLRLNPGASATEIKSAYRSLAKVYHPDAAARRLPECDDGDFIEIRNAYETLSDPSARQIYDLSLMAHGGRNRRFTAAPVTQKRNSGYYTNRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04873 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 3 161 - -
Mepo3g04873 161 Gene3D DnaJ domain 46 148 IPR036869 -
Mepo3g04873 161 SMART dnaj_3 58 118 IPR001623 -
Mepo3g04873 161 Pfam DnaJ domain 60 123 IPR001623 -
Mepo3g04873 161 SUPERFAMILY Chaperone J-domain 57 136 IPR036869 -
Mepo3g04873 161 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Mepo3g04873 161 CDD DnaJ 61 115 IPR001623 -
Mepo3g04873 161 PRINTS DnaJ domain signature 98 118 IPR001623 -
Mepo3g04873 161 PRINTS DnaJ domain signature 79 94 IPR001623 -
Mepo3g04873 161 PRINTS DnaJ domain signature 61 79 IPR001623 -
Mepo3g04873 161 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04873 Mepo-Chr3 60847507 60848457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04873 50 123 C2H2 Transcription Factor Family AT1G74250 41.558 2.48e-07 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04873 3 60847507 60848457 Mepo3g04873 3 60847507 60848457 ECH