Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04858 ATGCCTGAAACCTTAAGGAATCTCTCACTTTCTCCCAAAAACTTCTCCTTCACCTTCACCTTACTTCTCTTATTAAACTCTTTTCTTCTCATTCCATTTTGTTACTCTTACTCACTTAATGAACAAGGAAAAGCTCTTTTAGCATGGAAAAACAGTTTAAACAATACATTAGAGTTAGATGCATTATCATCATGGAATTCTTCATCCACAACACCATGCAATTGGTTTGGAGTGTTTTGCAATTCACAAGGAGATGTGATAGAGATAAACTTGAAATCAATGAACTTAGAAGGCTCATTACCTACAAATTTTCAATCTCTAAAGTCCTTGAATACTCTCATCCTCTCATCAACAAACATCACAGGAAGGATACCAAAAGAGATTGGAGACTATCAAGAGCTTATCTTTGTTGATCTAAGTGGAAATTCTCTACTTGGTGAAATACCAGAAGAAATTTGCAAGCTAAACAAACTTGAGAGTTTGTTTCTTCACACAAATTTCTTTGAAGGAAACATTCCATCCAACATTGGAAATCTATCAAGTCTTGTGAACTTGACACTCTATGATAATCATTTGAGTGGTGAAATTCCAAAGAGTATTGGTTTTTTGAACAAGCTTCAAGTGTTTAGAGCTGGTGGAAATAAAAATCTCAAGGGTGAGATCCCTTTGGAGATTGGAAACTGCACAAACTTGATCTTATTAGGCCTTGCAGAAACAAGTATTTCAGGAAGCATTCCTTCTTCAATCCAAATGCTGAAAAGAATCAAAACCATAGCTATTTATACAACTCTATTGTCAGGCTCAATTCCACAAGAGATTGGAAATTGCAGTGAGTTGCAGCACCTTTATTTGTATCAGAACTCTCTCTCAGGTTCAATTCCAGCTCAAATTGGAGACCTTAACAAGCTGAAGAGTTTACTTCTATGGCAGAACAATTTAGTAGGTACTATTCCAGAAGAGATTGGAAGATGCAGAGAGATTCAAGTTATAGATTTTTCAGAAAATCTTTTAACAGGTAGCATACCGAAGATTCTCGGCGAGCTTTCAAATCTTCAAGAGCTTCAATTGAGTGTCAATCATCTCTCAGGTATCATACCTCCTGAGATTTCACATTGCACCTCTTTGACTCAACTTGAAGTTGACAACAATGCTCTCACTGGTGAGATTCCTCCTCTTATTGGCAACTTGAGAAACTTGAATTTGTTCTTTGCATGGCAGAACAAGTTAACAGGAAAAATCCCAGATAGTCTTTCAGATTGTCAAGAACTTCAATCACTTGATCTTTCATACAATAATTTGATTGGTCCAATACCAAAAACACTTTTTAATTTAAGGAATCTCACAAAACTTTTGCTTATTTCCAATGATTTGTCAGGCTTTATACCACCTGATATAGGAAATTGCACAAACCTCTATAGGCTTAGATTGAATCACAATAGAATATCAGGTAACATTCCAAATGAGATTGGAAACTTGAATAGTTTGAATTTTGTTGATATTAGCAACAATCATCTTGTAGGAGAGATTCCTACAACACTTTCTGGATGCCAAAATCTTGAGTTTCTTGACCTTCATTCCAATATTCTCGCTGGTTCGGTCCCAGATTCTCTTCCTAAAAGCCTTCAATTGGTTGACTTGTCAGACAATAGGCTATCAGGTGAATTGAGTCACACAATAGGCTCGTTAGTCGAGCTAAACAAACTAAACTTAGGAAGGAATCGACTAAACGGAAGAATTCCATCTGAGATCTTATCTTGCTCTAAACTACAGCTTCTAGACCTTGGAAGCAATAGTTTCACAGGAGAAATTCCAAAGGAATTGAGTCTAATTCCTTCACTAGAAATCTCTCTTAATCTCAGCTTCAACCATTTTTCTGGTGAAATTCCATCACAATTCTCTAGTCTTAGCAAACTAAGTGTGCTTGATCTCTCACATAACAAACTCTCAGGGAATTTAGATCCTCTCTCTGACCTTCAAAATCTTGTTTCCTTAAATGTTTCCTTCAATGCCTTCTCTGGTAAGTTACCTAACACACCATTCTTCCATAATCTCCCTCTCAGTGATCTTGCCGAAAATGAAGGTCTTTACATTGCCAGTGGTGTTGTAAATCCTTCTGATAGAATAGAATCCAAAGGTCATGCAAAATCAGTTATGAAATCTGTAATGTCCATTCTATTAAGCACAAGTGCAGTACTAGTCCTGCTCACAGTCTATGTTTTGATTCGTTCGCATATGGCGAACAAAGTGATCATTGAAAATGAAAGCTGGGAGGTGACTTTGTATCAAAAGTTTGAACTCTCGATTGACGACATAGTCTTGAATCTTACATCATCCAATGTGATTGGCACTGGAAGTTCAGGAGTTGTTTACAAGGTAACAATTCCAAACGGCGAAACACTTGCAGTTAAAAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAATTCTGAAATTCAAACCTTAGGTTCAATCAGACACAAGAATATCATTAGGCTTCTTGGTTGGGGATCCAACAGGAACCTGAAGCTGCTGTTTTATGACTATCTCCCCAATGGAAGCCTCAGCTCATTACTTCATGGTTCAGGAAAAGGAAAAGCAGAATGGGAAACAAGATATGATGTTATATTAGGTGTGGCTCATGCACTTTCATATTTGCATCATGATTGTGTTCCTTCTATAATTCATGGAGATGTCAAAGCCATGAATGTTCTATTAGGTCCTGGATATCAACCTTACCTAGCTGACTTTGGCTTGGCAAGAACTGCAACTGAAAATGATGACAATACTAATTCCAAGCCAATCCAAAGACATCATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAACATGCATCAATGCAGCCTATAACTGAGAAGAGTGATGTTTACGGTTATGGTATGGTTCTACTTGAAGTCCTAACAGGAAGGCACCCTTTAGATCCAAGTCTTCCAGGGGGTGCAAACATGGTTCAATGGGTTAGGAACCATTTATCTAGCAAAGGAGACCCTTCTGAAATTTTGGACACAAAGCTTAGAGGAAGAGCTGACACCACCATGCATGAAATGCTACAAACTTTAGCAGTGTCATTTCTATGTGTAAGCACTAGAGCTGCTGACCGTCCAGCAATGAAAGATATTGTTGCAATGCTCAAAGAAATTAGACCTGTTGAAACATCAAGAGGAGACACTGATGTATTGAAACTAGGAGGTTTAACATCACAATCACATAGTTCTCCACCACCTCCTAAGAATGTACTTTTACATGGATCTTCTACTTGTTCCTATAATTTCTCAGATGGTTAA 3306 0.3763 MPETLRNLSLSPKNFSFTFTLLLLLNSFLLIPFCYSYSLNEQGKALLAWKNSLNNTLELDALSSWNSSSTTPCNWFGVFCNSQGDVIEINLKSMNLEGSLPTNFQSLKSLNTLILSSTNITGRIPKEIGDYQELIFVDLSGNSLLGEIPEEICKLNKLESLFLHTNFFEGNIPSNIGNLSSLVNLTLYDNHLSGEIPKSIGFLNKLQVFRAGGNKNLKGEIPLEIGNCTNLILLGLAETSISGSIPSSIQMLKRIKTIAIYTTLLSGSIPQEIGNCSELQHLYLYQNSLSGSIPAQIGDLNKLKSLLLWQNNLVGTIPEEIGRCREIQVIDFSENLLTGSIPKILGELSNLQELQLSVNHLSGIIPPEISHCTSLTQLEVDNNALTGEIPPLIGNLRNLNLFFAWQNKLTGKIPDSLSDCQELQSLDLSYNNLIGPIPKTLFNLRNLTKLLLISNDLSGFIPPDIGNCTNLYRLRLNHNRISGNIPNEIGNLNSLNFVDISNNHLVGEIPTTLSGCQNLEFLDLHSNILAGSVPDSLPKSLQLVDLSDNRLSGELSHTIGSLVELNKLNLGRNRLNGRIPSEILSCSKLQLLDLGSNSFTGEIPKELSLIPSLEISLNLSFNHFSGEIPSQFSSLSKLSVLDLSHNKLSGNLDPLSDLQNLVSLNVSFNAFSGKLPNTPFFHNLPLSDLAENEGLYIASGVVNPSDRIESKGHAKSVMKSVMSILLSTSAVLVLLTVYVLIRSHMANKVIIENESWEVTLYQKFELSIDDIVLNLTSSNVIGTGSSGVVYKVTIPNGETLAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVILGVAHALSYLHHDCVPSIIHGDVKAMNVLLGPGYQPYLADFGLARTATENDDNTNSKPIQRHHYLAGSYGYMAPEHASMQPITEKSDVYGYGMVLLEVLTGRHPLDPSLPGGANMVQWVRNHLSSKGDPSEILDTKLRGRADTTMHEMLQTLAVSFLCVSTRAADRPAMKDIVAMLKEIRPVETSRGDTDVLKLGGLTSQSHSSPPPPKNVLLHGSSTCSYNFSDG 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04858 1101 SMART LRR_typ_2 179 203 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 300 324 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 444 468 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 635 665 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 348 372 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 562 586 IPR003591 -
Mepo3g04858 1101 SMART LRR_typ_2 492 516 IPR003591 -
Mepo3g04858 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Mepo3g04858 1101 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 312 1051 - -
Mepo3g04858 1101 Gene3D Ribonuclease Inhibitor 39 199 IPR032675 -
Mepo3g04858 1101 Gene3D Ribonuclease Inhibitor 232 341 IPR032675 -
Mepo3g04858 1101 FunFam Leucine-rich receptor-like protein kinase family protein 39 202 - -
Mepo3g04858 1101 Pfam Leucine rich repeat 327 385 IPR001611 GO:0005515
Mepo3g04858 1101 Pfam Leucine Rich Repeat 423 444 IPR001611 GO:0005515
Mepo3g04858 1101 Pfam Protein kinase domain 778 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04858 1101 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Mepo3g04858 1101 FunFam Putative LRR receptor-like serine/threonine-protein kinase 616 701 - -
Mepo3g04858 1101 FunFam Leucine-rich receptor-like protein kinase family protein 343 615 - -
Mepo3g04858 1101 Gene3D Ribonuclease Inhibitor 439 701 IPR032675 -
Mepo3g04858 1101 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524
Mepo3g04858 1101 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 849 1069 - -
Mepo3g04858 1101 SMART serkin_6 775 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04858 1101 ProSiteProfiles Protein kinase domain profile. 775 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04858 1101 SUPERFAMILY Protein kinase-like (PK-like) 773 1051 IPR011009 -
Mepo3g04858 1101 SUPERFAMILY L domain-like 616 683 - -
Mepo3g04858 1101 MobiDBLite consensus disorder prediction 1069 1086 - -
Mepo3g04858 1101 Pfam Leucine rich repeat N-terminal domain 40 81 IPR013210 -
Mepo3g04858 1101 Gene3D Phosphorylase Kinase; domain 1 740 848 - -
Mepo3g04858 1101 SUPERFAMILY L domain-like 40 315 - -
Mepo3g04858 1101 SUPERFAMILY RNI-like 293 614 - -
Mepo3g04858 1101 FunFam Putative LRR receptor-like serine/threonine-protein kinase 760 848 - -
Mepo3g04858 1101 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 215 340 - -
Mepo3g04858 1101 Gene3D Transferase(Phosphotransferase) domain 1 849 1067 - -
Mepo3g04858 1101 PRINTS Leucine-rich repeat signature 635 648 - -
Mepo3g04858 1101 PRINTS Leucine-rich repeat signature 423 436 - -
Mepo3g04858 1101 MobiDBLite consensus disorder prediction 1062 1086 - -
Mepo3g04858 1101 Gene3D Ribonuclease Inhibitor 342 438 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04858 Mepo-Chr3 60720917 60724990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04858 37 1100 Receptor kinase-like Gene Family AT5G56040 65.514 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g04858 Pkinase 2.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04858 - - psat:127084696 1910.58