Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04856 ATGCCAGAAACCCTCTATCTTTGTGTCAACATACTCGATCGATTTCTTTCCAAAATCGCGTTTGAAGTCACGACAACGGATAAACTAAAACTCATGGGTCTCTCCTCATTGTTGTTGGCTTCCAAGTATGAACAAAGAAGTGCGGTTGGTATTTGTGACATCGAATACATGGCTGATTATATTTATATGCCAGAAGAAATATGTCAAATGGAGAAGCTAATCCTAAAAGAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTCTTATTAGAAACATAAGGGCATGCCTTTTATCTGATGAAGACAAAATCATGGAGAACATGGTGTTTTTCTTTTCTGAACTCAGCTTGACAAATCATTCTATTGTGTGCGACTATAAGCCTTCACTGATTGCTGCTTGTTCCCTGTATTGTGCAAGGTTTGTTGTTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATGTGTACAGGGTACTCCGAGGAAAAGTTATTGTCTTGTGCCAGTGTTATGATGGAATCGTGCATTCAAATTTGTGGAGATGGATACATGGAAGTTTTTAAGAAATTTTCAAGTTTATGTCAATCTAGGTGCTTACCTGCTGTACCAGGTGCCATTCGTCCAGCAGGTGTATTTCACGAAGCTCCACTTGGTTTTCTGTTTCGATAG 675 0.3881 MPETLYLCVNILDRFLSKIAFEVTTTDKLKLMGLSSLLLASKYEQRSAVGICDIEYMADYIYMPEEICQMEKLILKELGWILTVPTPYVFLIRNIRACLLSDEDKIMENMVFFFSELSLTNHSIVCDYKPSLIAACSLYCARFVVERYPFWSNDLKMCTGYSEEKLLSCASVMMESCIQICGDGYMEVFKKFSSLCQSRCLPAVPGAIRPAGVFHEAPLGFLFR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04856 224 PANTHER CYCLINS 1 175 IPR039361 -
Mepo3g04856 224 Gene3D - 78 203 - -
Mepo3g04856 224 SMART cyclin_7 2 76 IPR013763 -
Mepo3g04856 224 SMART cyclin_7 89 175 IPR013763 -
Mepo3g04856 224 SUPERFAMILY Cyclin-like 2 80 IPR036915 -
Mepo3g04856 224 Pfam Cyclin, C-terminal domain 85 194 IPR004367 -
Mepo3g04856 224 PIRSF Cyclin_A_B_D_E 1 200 IPR046965 GO:0016538|GO:0044772
Mepo3g04856 224 Pfam Cyclin, N-terminal domain 2 82 IPR006671 -
Mepo3g04856 224 SUPERFAMILY Cyclin-like 84 194 IPR036915 -
Mepo3g04856 224 Gene3D - 1 77 - -
Mepo3g04856 224 SMART Cyclin_C_2 85 204 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04856 Mepo-Chr3 60683069 60684406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04856 1 193 Core Cell Cycle Gene Families AT2G26760 39.896 1.20e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04856 K21777 - pvy:116130998 167.162