Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04839 ATGCTTTGTTTTCACTCCAAAGTTTCAAGTTTATATGATTCAGAAAAGCTCATCTCCAATGAAAAAAAGAAGTTTAGTGATTATGATGATGATCTATACAGATTTTATCACCTTGAAGAGTCTCAAATCCAGGGAAATTCAAACGGGTTCAAGGTAGATTCTCAAATGAGAAAGAATGTCGTAGATTGGTTGATACAAACACATTACCAACAAAAACTGATGCCGGAAACCTTTTATCTCTGTGTCAACATCCTTGACCGAGTACTTTCCAAAATCAATTTTGAAGTCAAGACGATGGAGAAACTTAAACTTATCGGTCTCTCTTCGTTGTTGTTGGCTTCCAAATATGAACAAAGAAAAGCAGTTGGTGTTTATGACGTCGAGTACATGGCTGATTATATTTATATGCCAGAAGAAATATGTCAAATGGAGAAGCTTATCCTACAAGAACTTGGTTGGATTTTAACGGTTCCAACACCTTATGTTTTTCTTGTTAAAAACATAAGGGCATGTGTTTTATCTGATGAAGACAAGATCATGGAGAACATGGTGTTTTTCTTTTCGGAACTCAGCTTGACAAATCATTCCATTGTGTGCGACTACAAGCCTTCATTGATTGCCGCTTGTTCCGTGTATTGTGCAAGGTTTGTTGTTGAAAGGTATCCCTTTTGGAGCAATGATTTGAAGATGTGTACAGGGTACTCCGAGGAAAACCTGTGGTCTTGTGCCTATGTTATGATGCAATCGTGCATTCAAATTTGTGGAGATGGACACATGGAAGTCTTTAAGAAATTTTCAAGTTTATATCAATCTAGGGTTTCATGTATTGCTCAAGAATTTCTTGAAGTTTAA 852 0.3638 MLCFHSKVSSLYDSEKLISNEKKKFSDYDDDLYRFYHLEESQIQGNSNGFKVDSQMRKNVVDWLIQTHYQQKLMPETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYDVEYMADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVKNIRACVLSDEDKIMENMVFFFSELSLTNHSIVCDYKPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLWSCAYVMMQSCIQICGDGHMEVFKKFSSLYQSRVSCIAQEFLEV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04839 283 Pfam Cyclin, N-terminal domain 34 155 IPR006671 -
Mepo3g04839 283 FunFam G2/mitotic-specific cyclin 42 156 - -
Mepo3g04839 283 SUPERFAMILY Cyclin-like 25 153 IPR036915 -
Mepo3g04839 283 PANTHER CYCLINS 21 264 IPR039361 -
Mepo3g04839 283 PIRSF Cyclin_A_B_D_E 5 282 IPR046965 GO:0016538|GO:0044772
Mepo3g04839 283 SMART cyclin_7 62 149 IPR013763 -
Mepo3g04839 283 SMART cyclin_7 162 248 IPR013763 -
Mepo3g04839 283 ProSitePatterns Cyclins signature. 57 88 IPR006671 -
Mepo3g04839 283 Pfam Cyclin, C-terminal domain 158 275 IPR004367 -
Mepo3g04839 283 SUPERFAMILY Cyclin-like 157 277 IPR036915 -
Mepo3g04839 283 SMART Cyclin_C_2 158 279 IPR004367 -
Mepo3g04839 283 Gene3D - 46 150 - -
Mepo3g04839 283 Gene3D - 151 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04839 Mepo-Chr3 60481979 60482830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04839 10 276 Core Cell Cycle Gene Families AT2G26760 34.815 4.43e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04839 K21777 - zju:107412624 199.134