Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04827 ATGCTTGGACGATTTCTTTTCTTGATGGAATTGTTAGCTTCCCCCACCGTCTTCGCTCCATGTGATTCCACATTCAAGAAATCTGGTATACCATCAATCAATCTCCACCGATTCCGCTTTGTTATGTTGTCCTCATTTCCTTTGATAGAAACCTCTCGTAATTTCACTTTCTCTCAGCAAACCCAAATAAGGGTTTTCTCCACCATTCTCCTCTTCATTGTTCGATTGGACCAACGCTCTCCACCAACTTTACCCAGCAGAAGCAATAACTTTGGCAAAACTAGGATGCGTCAAAAGAATAGGCAGTTTAAATCCTTGAAGCAAATCCCTGATTTCTCAAAGTGTGATTCAACATTGAGTGCTGGTCGAGATAGCTCTCGCAATCCTACATCTTTACGTAGATGTCAACGTTGTGTAGTCAATGAAAATAATACTCCTCTAATGCGCCATGGGCCAGCTGGAGCAAAAACATTATGTAATGCATGCGGCATCGTTTGGGCCAAAAAGGACTCATCTGAGAGACCACTCCGTACTACATTCTCTGAACCTCCAAGGAGTACGGAGACATTTGTTCATCCTGCCACTCCTAGAAGTGTTGTAGCTGCTGCTGCTGAGAATGAGGTTGGCCCATCTACCTCTAGGGTAGTTCAGGAGGAACCAGTGGGCGAAGAGGTTCCCGTGGTTGTTCGTGAGCCTTTGCTTCTCCTCAGTTATAAATAG 720 0.4458 MLGRFLFLMELLASPTVFAPCDSTFKKSGIPSINLHRFRFVMLSSFPLIETSRNFTFSQQTQIRVFSTILLFIVRLDQRSPPTLPSRSNNFGKTRMRQKNRQFKSLKQIPDFSKCDSTLSAGRDSSRNPTSLRRCQRCVVNENNTPLMRHGPAGAKTLCNACGIVWAKKDSSERPLRTTFSEPPRSTETFVHPATPRSVVAAAAENEVGPSTSRVVQEEPVGEEVPVVVREPLLLLSYK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04827 239 PANTHER GATA TRANSCRIPTION FACTOR 28 95 195 IPR045280 GO:0006355
Mepo3g04827 239 Pfam GATA zinc finger 135 169 IPR000679 GO:0006355|GO:0043565
Mepo3g04827 239 SMART GATA_3 129 183 IPR000679 GO:0006355|GO:0043565
Mepo3g04827 239 MobiDBLite consensus disorder prediction 83 103 - -
Mepo3g04827 239 Gene3D - 131 179 IPR013088 GO:0006355|GO:0008270
Mepo3g04827 239 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 130 171 - -
Mepo3g04827 239 CDD ZnF_GATA 134 169 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04827 Mepo-Chr3 60359265 60364290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04827 95 169 Tify Gene Family AT1G51600 40.000 8.31e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo3g04827 GATA 2.1e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04827 - - mtr:11445335 152.14