Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04823 ATGTCTCCAACAACCATAATCATCACGCTCCTCTTCTTCCTCATTCCAACCACACTCTCACAACACACAACCTTCAACTTCTCTTCATTCACCCTCCGCAACATCACCCTCCTCGGTGACTCCTTCCTCCGCCGTGGCATCGTCGGTCTCACACGCTCCACCACCGTCCCTGCTTCTAGCTCCGGCACACTTCTTTACAACAACCCAATTTCTCTTATACCCAATTCATCTTTCTCTTTCAACACCAATTTCACTTTCTCTATTACTAACACAAACCCTCCTTCTTCCTCACTCAACCACTTCTCATTCTTTATCAATTCCACTACTAGTTTCATTTCTCTTGATTTTCACACTAACAATAACCATGTTGGTTTTGATTTCAACAATAGTTCAATCCAAAAAACTGTTGATGATACCATTGTTTTCAACTTCACTAGTGGAAACTTGATCACTTCTTGGATTGATTATAATGGTTTCAACAAAAACTTGAGTGTTTTCTTAAGCTATGCAAATTCAAGTTTTTCTAGTTCAAAACCTGAAAAACCTGTTTTGAGTGTTGATTTTGATCTTTCTGAGTATTTCAAGAAGACTGAGATTCTGTATTTGGGGTTTGTTGGTTCTGCTGAAGGAAGTACTGAGCTTCAACAAATCATGAATTGGAACTTTGAATCTTTTCAGTTTCTAGCTGTTAATCAAACTCAGAATAAAAATTCAAGCTTTCACCATTTTGGTTATCAAGTTGAGGATATTCCTGCTTCAAACTCAACAAAAAATCATCATAGAAAGAGATTTGTGATTGGTTTATGTGTTGCTATTGTGGGTCCATGTTTTTTCTTTGTTCTGCTTTTGGTTTTAGGGTATGTTTCTTTTAAGAAATGGAATAGTTTAAATAAGCTTAAGAAGAGTAAAAGTTCTATAGGGTGTCCTAAAGAGTTTGGTTATAAGGAATTGAAGTTTGCTACAAAAGGGTTTCATGGTTCAAGGATAATTGGGAATGGTTCATTTGGGACAGTTTATAAGGCTTTGCTTGTTTCTTCTGGTACAGTTGCTGCTGTTAAAAGATCAAGACATTCACATGAAGGGAAAACCGAGTTTTTATCGGAGTTGTCGATTATAGCTGGTTTAAGGCACAAGAATTTGGTTCAACTCTTAGGTTGGTGTGTTGAGAAAGGTGAATTGTTGCTTGTGTATGAGTTTATGGTTAATGTTGCTTGTGGTAGAAGGCCAATTGAGAAAGAGGGTCAAGAGATGGTGAATTTGGTTGATTTTGTTTGGGGACTTTACTCTCAAGGGAAGTTAATTGAGGCTGTTGATAAGAGATTGAATGGTGAGTTTGATGAAGTTGAAATGAAGAAGATGTTACTATTAGGGTTAAGTTGTGCAAATCCAAATAGTGATGAAAGGCCTTCTATGAGAAGAGTTTTGCAAATTCTTAACAATGAAGCTTTGCCTGTTGTTGTGCCTAAAGTGAAACCTTGCCTTAGTTTCTCTTCTGGATTGTTATTGAGTCTTGATGAAATTGTTTCTGATTTTGATGAAAGGTTTAGTTCTAATCAATTTAGTTGCAAGATCAAAATTGAACCAAGTTGA 1590 0.3667 MSPTTIIITLLFFLIPTTLSQHTTFNFSSFTLRNITLLGDSFLRRGIVGLTRSTTVPASSSGTLLYNNPISLIPNSSFSFNTNFTFSITNTNPPSSSLNHFSFFINSTTSFISLDFHTNNNHVGFDFNNSSIQKTVDDTIVFNFTSGNLITSWIDYNGFNKNLSVFLSYANSSFSSSKPEKPVLSVDFDLSEYFKKTEILYLGFVGSAEGSTELQQIMNWNFESFQFLAVNQTQNKNSSFHHFGYQVEDIPASNSTKNHHRKRFVIGLCVAIVGPCFFFVLLLVLGYVSFKKWNSLNKLKKSKSSIGCPKEFGYKELKFATKGFHGSRIIGNGSFGTVYKALLVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYEFMVNVACGRRPIEKEGQEMVNLVDFVWGLYSQGKLIEAVDKRLNGEFDEVEMKKMLLLGLSCANPNSDERPSMRRVLQILNNEALPVVVPKVKPCLSFSSGLLLSLDEIVSDFDERFSSNQFSCKIKIEPS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04823 529 Gene3D - 21 225 - -
Mepo3g04823 529 Pfam Legume lectin domain 115 227 IPR001220 GO:0030246
Mepo3g04823 529 Pfam Legume lectin domain 23 110 IPR001220 GO:0030246
Mepo3g04823 529 SUPERFAMILY Protein kinase-like (PK-like) 301 402 IPR011009 -
Mepo3g04823 529 ProSiteProfiles Protein kinase domain profile. 324 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04823 529 Gene3D Transferase(Phosphotransferase) domain 1 398 492 - -
Mepo3g04823 529 PANTHER - 399 488 - -
Mepo3g04823 529 Pfam Protein kinase domain 325 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04823 529 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 226 IPR013320 -
Mepo3g04823 529 Gene3D Phosphorylase Kinase; domain 1 288 397 - -
Mepo3g04823 529 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Mepo3g04823 529 SUPERFAMILY Protein kinase-like (PK-like) 405 502 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04823 Mepo-Chr3 60295432 60297375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04823 385 513 Receptor kinase-like Gene Family AT5G55830 61.069 1.18e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo3g04823 Lectin_legB 1.8e-19 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04823 - - gmx:100808744 355.91