Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04804 ATGGAGCAAATTGTGATACCTGTTTTTTACAACATTGATCCATCACATGTGAGGAACCAGACTGGAAAATACATGCGAGCCTTTGAAAAACATAAGCGAGATTTGAAGTACAATAATGACATATTGAAGAAATGGAAAGCTTCTCTCACCGAGGCAGCTAGTTTAGTTGGTTGGGACTCTCAAAATTATAGACTTGTAAAACTTTCTTCCCCTCTTTCATATGCTAGGACTGAATCAGACTTCATCAAGGACATTGTTGAAGAGGTTTTGCGGAAGCTGAATCTCAGATACCAATATGAAATTAAGGGATTTGTTGGAATCGAGAAGAATTATGAACAAATTGAATCAATGCTGAAAATTGGGTCAAATGAAGTCAGAGTCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACCGCCCTTGCTAAGACTTTATATGGTAAACTTCATTCCCAATTTGAAGGCCGTTGCTTCCTCAATGTAATGGATGAATCAAACAAGTATGGACTCAATGTTCTACACAATAAAGTTGTTTCTTCATTGTTAGAGGAAGAAAATCTTCATCTTGATGCATCCTACATAGAAGCACCTTTCACCGTGATAAGGATTGCACGTGCACAAGTTCCATGCTTGTTTGATTTTCAGACAATCGAGGCATCAATAACTATTCCTCCTATTCCAAAATCTGGCTTGTGTGGTTTCATATTTTGCATCATTCATTCTTCAGGCCTCCATGTTTACCACCATTCCCTTCATTGTATCATCTTTGAACACGGCAAAGAAGTTGACAGACATCGTATTTATCAAAATTATCCTGGGATATTATTTTCAGATCATGTATTGATATGTTGGCATGGTTACAACATACAAGAAAGTGGAAGTAATGATTGCAACTTATCATTTAAATTCATACTTCAAGGTCCTAATGAAGAATTGTGGTGGTCAACAGAGGGGATAAAGGGGTGTGGGGTCTTACCTGTATATGGGGCGGGTATTAGTATTAGTAAGGAAATTGATAAATTTTTGAAGAAGGAAATTGGTAAATTAAAATGTATTGCTCAAGACTGA 1068 0.3727 MEQIVIPVFYNIDPSHVRNQTGKYMRAFEKHKRDLKYNNDILKKWKASLTEAASLVGWDSQNYRLVKLSSPLSYARTESDFIKDIVEEVLRKLNLRYQYEIKGFVGIEKNYEQIESMLKIGSNEVRVLGIWGMGGIGKTALAKTLYGKLHSQFEGRCFLNVMDESNKYGLNVLHNKVVSSLLEEENLHLDASYIEAPFTVIRIARAQVPCLFDFQTIEASITIPPIPKSGLCGFIFCIIHSSGLHVYHHSLHCIIFEHGKEVDRHRIYQNYPGILFSDHVLICWHGYNIQESGSNDCNLSFKFILQGPNEELWWSTEGIKGCGVLPVYGAGISISKEIDKFLKKEIGKLKCIAQD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04804 355 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 58 IPR035897 -
Mepo3g04804 355 Gene3D - 90 201 IPR027417 -
Mepo3g04804 355 ProSiteProfiles TIR domain profile. 1 93 IPR000157 GO:0007165
Mepo3g04804 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 186 IPR044974 GO:0006952
Mepo3g04804 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 188 IPR027417 -
Mepo3g04804 355 Gene3D - 1 89 IPR035897 -
Mepo3g04804 355 Pfam NB-ARC domain 108 170 IPR002182 GO:0043531
Mepo3g04804 355 Pfam TIR domain 2 97 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04804 Mepo-Chr3 60094244 60097783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04804 2 213 WRKY Transcription Factor Family AT4G12020 27.230 1.45e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04804 - - cam:101499873 322.013