Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04803 ATGATTAGTGCAGATCCATCACATGTGAGGAACCAGACCGGAAGTTACAAGAAAGCTTTTGCAAAACATAAGCGAGATTTGAAAAGCAATAATGACAAGTTACAGGAATGGAAAGCCGCTCTCACTGAGGCAGCTAGTTTAGTTGGTTGGGACTTTCAAAATTTTGAACTTATAAAACCTTCTTCCCCTCTTTCGTATGCTAGGACTGAATCACACTTCATTAAGGATATTGTTGAAGATGTTTTGCGGAAACTGAATCTTAAATACCCATATGAAATTAAGGCTGGGCTTGTTGGAATTGAGAAAAGTTGTGACCAAATTGAATCAATGCTGAATATTGGGTCAAATGATGTTAGAGTTGTTGGAATATGGGGCATGGGTGGCATAGGAAAGTCCACCCTTGCGAGTACTTTATTTGCTAAATTTAATTCCCATTTTGAAGGCAGTCGTTTCCTTAATGTAAGGGATGAATCAAACAAGCATGGACTCAATGTTATACACAATAAACTTTTTTCTTCATTGTTAGAGGAAGAAAATCTTCATCCTGGTGCATCCTACATAGAATCCTCTTTCTCCATGAGAAGGATTGCACGAGCACAAGTGCCACTTTATTTTGATTTTCATACAATCAGGGCTTCAATTACTCTTCTTCCTATTCCAAAATCTGACTTGGTTGGTTTCGTATTTTGCATCCTTTTTTCTGAGGGCTTCACTGTTAACCACCATGCCCTTCATTGTATTATCTTTGAATGCGGAAAAGAAGTCGACAGACATCGCATTAGTCTCGATTATCTCAGGACATTAATTTCAAATCATTTATTGATATGCTGGCATGGTTACAACAGACAAGAAAATGGAAGTTATGATATTTGCAACTTATCATTTCAATTCATACTTCAAGGTCCCAACGAAGAATTGCAGTGGTCAACGGAGGGGATAAAGGGGTGTGGGGTTGAACCGGTATATTTGAGTAGTAGCATTAGTAAGGAAATTGGTAAATTAAAATCCATTGCTCAAGACTCTGATGTGTCTATATCAATTGGAGGTGAAGGTAGAAGCTCCAACAATGAAAATGAAGATGACAAGGAACAACCTTCTGTTAGTAGACCTCCTATTAAACATGTATATGTTAGACGCAGGCGCAAAGTAATTAGACCCAAGCTTGTGTAA 1170 0.3795 MISADPSHVRNQTGSYKKAFAKHKRDLKSNNDKLQEWKAALTEAASLVGWDFQNFELIKPSSPLSYARTESHFIKDIVEDVLRKLNLKYPYEIKAGLVGIEKSCDQIESMLNIGSNDVRVVGIWGMGGIGKSTLASTLFAKFNSHFEGSRFLNVRDESNKHGLNVIHNKLFSSLLEEENLHPGASYIESSFSMRRIARAQVPLYFDFHTIRASITLLPIPKSDLVGFVFCILFSEGFTVNHHALHCIIFECGKEVDRHRISLDYLRTLISNHLLICWHGYNRQENGSYDICNLSFQFILQGPNEELQWSTEGIKGCGVEPVYLSSSISKEIGKLKSIAQDSDVSISIGGEGRSSNNENEDDKEQPSVSRPPIKHVYVRRRRKVIRPKLV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04803 389 Pfam NB-ARC domain 101 173 IPR002182 GO:0043531
Mepo3g04803 389 Gene3D - 1 85 IPR035897 -
Mepo3g04803 389 MobiDBLite consensus disorder prediction 354 368 - -
Mepo3g04803 389 Gene3D - 86 196 IPR027417 -
Mepo3g04803 389 MobiDBLite consensus disorder prediction 345 374 - -
Mepo3g04803 389 Pfam TIR domain 4 98 IPR000157 GO:0007165
Mepo3g04803 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 191 IPR044974 GO:0006952
Mepo3g04803 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 183 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04803 Mepo-Chr3 60067338 60071586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04803 31 206 WRKY Transcription Factor Family AT4G12020 29.379 1.24e-15 77.4