Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04802 ATGTATTTTTCTTCTGTTGTATTTGTTACACTTGTAAAACTTTCTTCTCCTCTTTCATATGCTAGGACTGAATCAGACTTCATTAAGGACATTGTTGAAGAGGCTTTGCAGATGCTGAATCTCAGATACCAATATGAAATTAAGGGGCTTGTTGGAATTAAGAAGAATTATGAACAAATTCAATCAATGCTGAAAATTGGGTCAAATGAAATCAGAGTCCTTGGAATATGGGGTATGGGTAGCATAGGAAAGAGCACCCTTGCTAAGACTTTATACGCTAAACTTTATTCCCATTTTGAAGGTCGTTACTTCCTCAATGTAATGGATGAATCAAGAAAGTATGGACTCAATGTTTTACACAATAAATTTTTTTCTTCATTGTTAGAGGAAGAAAATCTTCATCCTGATGCATCCTACACAGAATCCCCTTTCTCCATGAGAAGGATTGCACATCCATCACATGTGAGGAAGCAAACTGGGAGTTACAAGCAAGCCTTTGCAAAACATAAGCGAGATTTGAAGCACAATAATGACAAGTTGGAGAAATGGAAAGCTGCTCTCACCGAGGCAGCTAATTTAGTTGGTTGGGACTCTCGAAGTTATAGGATTGAATCGGACTTTATTAAGGACATTGTTGAAGATGTTTTGCAGAAACTAAATCTTAGATACCCATATGAAATTAAGGGGCTTGTTGGAGTTAAGAAAAATTATGACCAAATTGAATCATTACTGAAAATTGAGTCAAATGATGTTGGAATCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTAGGACTTTATATGCTAAATTTTTTTCCCAATTCGAAGGTCGTTGCTTCCTCAATGTAATGGATGAAACAAACAAGTATGGACTCAATGGTCTACACAATAAATTTTTTTCTTCTTTGTTAGAGGAAGAAAATCTTCATCCTGATGCGTCCTACATAGAATCCTCTTTCTCCGTGAGAAGGATTGCACGTGCACAAGTTCCATGCAACTTTGATTTTAAGACAATAGAGGCTTCAATAAGTATTCCTCCAATTCCAAAATCTAACTTGTGTGGTTTCATATTCTGCATCGTTCTATCAGAGTGTTTCAGTGTTTACGAACATTCCCTTCATTGTGTCATCTTTGAACATGGCAAAGAAGTCGACAGATGTCGTCTCAGTTGCAATTATCTTGGGAAATTAATTTCAGATCACTTATTGATATGCTGGCATGGTTACAACAATCAAGCAAGTGGAAGTTATGAATTTTGCAACCTATCATTTCAGTTCCTACTTCAAGGTCACACGGAAAAATTGTGGTGGTCAACTGAGGGGATAAAGGGGTGTGGGGTCTTACCTGTATATGACTTAGAACGGGAGTTGGAAGGTGATAGTAGTAGTATCACTAGTACTCAAGACTCGGAAGGTGATGATACTGATGAAGTCGAAAGCTCTAACAATGAAAATGAAGATGATCAGAAACATCCTTGGTGTTCAATCGGATTCACTACATTGTTCTTTTCAAAAAAGTTCAGATCCTATAGGCTTCTTTTGCAACTTTTCCAACTTCTGATTGCTTGTGATTCTCACATGATAAATTGGAATGCTACGTACGAGAAGCTGAATGGTAACCTGAATCAGTTGAATCTTTTGAACTAA 1659 0.3737 MYFSSVVFVTLVKLSSPLSYARTESDFIKDIVEEALQMLNLRYQYEIKGLVGIKKNYEQIQSMLKIGSNEIRVLGIWGMGSIGKSTLAKTLYAKLYSHFEGRYFLNVMDESRKYGLNVLHNKFFSSLLEEENLHPDASYTESPFSMRRIAHPSHVRKQTGSYKQAFAKHKRDLKHNNDKLEKWKAALTEAANLVGWDSRSYRIESDFIKDIVEDVLQKLNLRYPYEIKGLVGVKKNYDQIESLLKIESNDVGILGIWGMGGIGKTTLARTLYAKFFSQFEGRCFLNVMDETNKYGLNGLHNKFFSSLLEEENLHPDASYIESSFSVRRIARAQVPCNFDFKTIEASISIPPIPKSNLCGFIFCIVLSECFSVYEHSLHCVIFEHGKEVDRCRLSCNYLGKLISDHLLICWHGYNNQASGSYEFCNLSFQFLLQGHTEKLWWSTEGIKGCGVLPVYDLERELEGDSSSITSTQDSEGDDTDEVESSNNENEDDQKHPWCSIGFTTLFFSKKFRSYRLLLQLFQLLIACDSHMINWNATYEKLNGNLNQLNLLN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04802 552 PRINTS Disease resistance protein signature 253 268 - -
Mepo3g04802 552 PRINTS Disease resistance protein signature 543 552 - -
Mepo3g04802 552 Pfam TIR domain 152 224 IPR000157 GO:0007165
Mepo3g04802 552 MobiDBLite consensus disorder prediction 464 493 - -
Mepo3g04802 552 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 131 IPR044974 GO:0006952
Mepo3g04802 552 Pfam NB-ARC domain 238 292 IPR002182 GO:0043531
Mepo3g04802 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 134 IPR027417 -
Mepo3g04802 552 Gene3D - 149 216 IPR035897 -
Mepo3g04802 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 314 IPR027417 -
Mepo3g04802 552 Gene3D - 217 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04802 Mepo-Chr3 60054339 60063622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04802 178 334 WRKY Transcription Factor Family AT4G12020 34.177 9.68e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04802 - - cam:101499873 299.286