Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04782 ATGTCGATAGACGATCCGTGTTTTGTGGAATGGAAAGAGCATTTTGTCTCACAAGAGCGTGGCCATCGTATAGTTCACTATTACCTAAAGGATTCTGCTGGGGAGTCCTTTCTGGCAGTTGTCGGCACTGAGAGGAGTGTTAGACACATGTGCTATGTTATTGCAGAGGAGTTCCTGGAAATATGTGGAATGGAAATTCCACCTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTTGATTGGCTGACGTCGATGCTATCAAAGCAGCATCTGCATGAAGATAGAAGTGTATGGCCTGCTCATAATTTGGCACTAGCTCATAAGATCGCAAATGGCAGTGTCAAAGAAGTTAGTGCACAAATGCTGGATGACAAGGACATTCCAAAGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGACTTGCGTGGACATGTGGCAAACAACTCAAACATTATCCTGCTTTTTGCAGAAATGGCATCCAAATTGGGATTCAATCCTTTGTTTTCGTCATGGGCAATGGAGAGAACCATTATGTTGCTTATTTGGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTTAAAGTAAGATGGTTTCACCACAATCAGGAAGTCAAGGGTGCAATTCCTGTACGAAATACTCACCCACGGGAAGTTTTCATCACATCCTATTCCCAAGTCATCAGTGCAGAGTGTGTTGACGGACCTGCCGCAGTCTTAACTCGTGAACACTACGAAAAATGCACACCTTATTTTTCCCCCTCTTCAACAGACAGAATACATTTGTGCTTTAGGCAATTAAAAGGCAACAAAGTCAAGCCCTTTGACTTAAGCAAACTGCGTGGCTACTATACTCAGCCAGCTCTTTCTTCCTTGCATGTTGATACTATCCACAACACCGAGTCTCACAGCAACAGCCTCACAGGAGAAGATGAAGATTTGGATGTTGGTGATGATGCAAAGCGGGGAGCCAAGAGGAGTAGAAGTGTTACTAATGGTCGAGAACGGGTTAGGAAGTTGATTAGGAGTAATCCAATGATGGGATACCAATCTTTCCAAGTTGTAAATTATGCAAGGCCGGATGGGAGATTGCTTTCTCTGAAAAAGGTTGATTGTAAACCTTGGTTTAATCCCACATACAAGGTTGATGACAAGATAGAGGTACTCAGTCAAGATAGTGGTATCCGAGGCTGCTGGTTCAGGTGTACAATTGTACAGGTAGCTCGGAAACAACTGAAAGTCCAATATGATGATGTTCAAGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTTTTAAGTTGGCCAAACCTGATAAACTTGAGATGAGACAACCTGGCCGATCGACCATCAGGCCAGCTCCACCTCTTGAAGAACAAGAATTGATTGTTGAGGTTGGAACTGCCGTCGATGCATGGTGGAGTGATGGGTGGTGGGAGGGGGTTATAACTACAACTGACAACTGTGGCGATGACAGTGTTCAAGTTTACTTTCCTGGTGAAAGCTTGCAAATGACAGTACATAAGAAGGACTTGAGAATATCTAGAGATTGGTTAGGCGGCACGTGGGTTAATATAAAGGCAAAGCCTGATATAACCCCAACTATATTAACTTCTATTAGCTTTAACACAAACCTCACTTTGTCTCCATCTTTGGAAAAAGATGCAGACTCGGTCGGTTTTGCTAATTCATGTCATGAAGTTCCTGCTGAGAAGTCTAATAAACCTGATATTGTTGAAGAGAAACTTGTATATTGTGGTGTTACTGAAAATGGGGTTTGTGTCCAAGATGATAAACCTCCTTCAGAAAAAAGCCCCCAAGTTGGTGACATTGAAGATGATGGTGGTAACAATGACAAGGACAATGGTGAGAGTGGTGATAACAACATTGTTAATAATGAGAATAGCGATGCAAAGGTGATTCAGACTTCTAGTGTTGAGTGTAAAAGTGTAGAACTAATGGAAGTTGCTGTATAA 1995 0.4251 MSIDDPCFVEWKEHFVSQERGHRIVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEEFLEICGMEIPPGFKWRSRREVVDWLTSMLSKQHLHEDRSVWPAHNLALAHKIANGSVKEVSAQMLDDKDIPKSNSKLSNSDIVWSGLAWTCGKQLKHYPAFCRNGIQIGIQSFVFVMGNGENHYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNTHPREVFITSYSQVISAECVDGPAAVLTREHYEKCTPYFSPSSTDRIHLCFRQLKGNKVKPFDLSKLRGYYTQPALSSLHVDTIHNTESHSNSLTGEDEDLDVGDDAKRGAKRSRSVTNGRERVRKLIRSNPMMGYQSFQVVNYARPDGRLLSLKKVDCKPWFNPTYKVDDKIEVLSQDSGIRGCWFRCTIVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLAKPDKLEMRQPGRSTIRPAPPLEEQELIVEVGTAVDAWWSDGWWEGVITTTDNCGDDSVQVYFPGESLQMTVHKKDLRISRDWLGGTWVNIKAKPDITPTILTSISFNTNLTLSPSLEKDADSVGFANSCHEVPAEKSNKPDIVEEKLVYCGVTENGVCVQDDKPPSEKSPQVGDIEDDGGNNDKDNGESGDNNIVNNENSDAKVIQTSSVECKSVELMEVAV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04782 664 MobiDBLite consensus disorder prediction 628 644 - -
Mepo3g04782 664 SMART BAH_4 163 282 IPR001025 GO:0003682
Mepo3g04782 664 Pfam Agenet domain 387 462 IPR008395 -
Mepo3g04782 664 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 384 648 - -
Mepo3g04782 664 MobiDBLite consensus disorder prediction 309 336 - -
Mepo3g04782 664 MobiDBLite consensus disorder prediction 609 627 - -
Mepo3g04782 664 Gene3D - 131 279 IPR043151 -
Mepo3g04782 664 MobiDBLite consensus disorder prediction 601 644 - -
Mepo3g04782 664 ProSiteProfiles BAH domain profile. 163 282 IPR001025 GO:0003682
Mepo3g04782 664 CDD BAH_plant_1 158 287 - -
Mepo3g04782 664 CDD Tudor_Agenet_AtDUF_rpt1_3 384 462 - -
Mepo3g04782 664 Pfam BAH domain 169 264 IPR001025 GO:0003682
Mepo3g04782 664 SMART agenet_At_2 468 526 IPR014002 -
Mepo3g04782 664 SMART agenet_At_2 382 447 IPR014002 -
Mepo3g04782 664 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04782 Mepo-Chr3 59784277 59789319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04782 394 524 PHD Transcription Factor Family AT5G58610 31.111 9.44e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04782 - - gmx:100306240 946.806