Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04747 ATGCATCCGTTCTGCTGTCGGAGAAGTAGACTAAATTGGTCAAACTTTGTAACCAAAAATCGTGTTTTCATTGCTTGCATTTATAGTTTCTTTATACTTTTGAATTGGGTAGCTGTTCTAAAGATTTATAATTTTCAGGATATCTTCACCGCTGGAAGTGACACTGCAGCAACGACAATAAACTGGGCAATGGCTGAGATGATGAAGGATCAAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAGTGTTATTAAGAAAAAGAGGAAAATTTGATGAAACCTTAATTTCTGAGTTAAAATACTTGAAAGGAATCATCAAAGAGGTCTTAAGAATGCACCCTCCTGGTCCTCTTCTAGTACCAAGGGTGTGTGGACAAGCTTGTGAGATTGATGGTTATCACATACCAATCAAAAGTAGGGTTATAATCAATGCTTGGGCAATTGGAAGGGATCCAAAATATTGGACTGATCCAGATAAGTTTTATCCGGAAAGATTTATTGATAGTTCTCTTGATTTCAAAGGAACAAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATTTGTCCGGGCATTAACTATGGTATGGCAAATGTTGAACTGACACTTGCTTTCTTATTGTGTCACTTTGATTGGAAGCTTCCTGGTGGAATGAAATGTGAGGATTTGGATATGACTGAGCTATTTGGAGCATCTGTTATAAGAAAAGATGACATGTATTTGATTCCAACCCCTTATTTCCCTGAAGTAGTGTTAAAAAATGAAAGGTTAGATGGGGAGGCCTTGATTGAAGAGTTGGATAGTGACGTGGTTTCAACATATAAGCCGGCAGCTATAGGTGAAATTAACATTTTGCTTAGTGTCTAA 870 0.3724 MHPFCCRRSRLNWSNFVTKNRVFIACIYSFFILLNWVAVLKIYNFQDIFTAGSDTAATTINWAMAEMMKDQRVLKKAQAEVRVLLRKRGKFDETLISELKYLKGIIKEVLRMHPPGPLLVPRVCGQACEIDGYHIPIKSRVIINAWAIGRDPKYWTDPDKFYPERFIDSSLDFKGTNFEYIPFGAGRRICPGINYGMANVELTLAFLLCHFDWKLPGGMKCEDLDMTELFGASVIRKDDMYLIPTPYFPEVVLKNERLDGEALIEELDSDVVSTYKPAAIGEINILLSV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04747 289 PRINTS E-class P450 group I signature 103 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS E-class P450 group I signature 180 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS E-class P450 group I signature 144 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS E-class P450 group I signature 40 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS E-class P450 group I signature 60 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS E-class P450 group I signature 190 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 183 192 IPR017972 GO:0005506|GO:0016705
Mepo3g04747 289 Gene3D Cytochrome P450 39 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PANTHER OS08G0105600 PROTEIN 47 249 - -
Mepo3g04747 289 SUPERFAMILY Cytochrome P450 43 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 FunFam Predicted protein 49 242 - -
Mepo3g04747 289 PRINTS P450 superfamily signature 51 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS P450 superfamily signature 181 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 PRINTS P450 superfamily signature 104 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo3g04747 289 Pfam Cytochrome P450 46 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04747 Mepo-Chr3 59264051 59265549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04747 47 248 Cytochrome P450 AT3G26300 50.980 9.34e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04747 - - gmx:102665189 322.398