Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04733 ATGACTAAACTTGCCCCTCTTGAAGAAACCCTTTTGAATGGTGAAGCTAGTGTAAGCAACAACAATTCTGATTCCAAAAAGACACTAAGAAATGAAATTTCAACCAGTTATTCAAATGCTGGATTTTTCAGCATTCTTACATTCTCATGGATGACTCCACTAATAGCTTTAGGCAATCAAAAGACTTTAGATCATGAAGACCTTCCATTGCTTTCTACCAATGACAGTGCCTATGGAACTTTTTCAACTTTTAGAAACAAGCTTGAGATGGAGTGTGGTAATGTTAGGAATGTGACCACTATTAACCTGGCCAAGGTGTTGTTCTTCTCAACATGGCAAGGAATTCTTATATCTGGCTTTTTTGCATTGTTGTACACATGTGCTTCTTATGTAGGACCCTACCTTATAGATAATCTTGTTCAATACCTCAATGATGAAAACAAGGTTAAAAATGAAGGCTATATTTTGGCTATGATGTTTGTTGGGGCAAAGCTTGTCGAATGTCTTTCTCAGAAGCACTGGATGTTTAAGTTCCAACAGGTTGGTGTCAGGATGCAATCAATGTTGGTGTCATTGATCTATGCTAAAGGTTTGACCCTTTCATGTAAATCGAAAGAGGGATACAGCAGCGGTGAAATCATCAACTTAATGACTGTTGATGTTGAAAGGATAGGTGAATTTTGTTGGTATATGCATGAACCATGGAGGGCTGTTCTGCAAGTTTCTTTGGCTTTGTTTATACTTCATAGAAGTGTAGGGGCTGCTTCGGTAGCTGCTTTTGCCGCCACCGTAGTTGTGATGTTGCTAAACCATCCCATGGCATCACTGCAAGAGAAGTTTCAAGGTAAGTTAATGGAATTTAAAGATAAAAGAATGAAGGCGACATCTGAGATTCTAATGAACATGAGGATTCTTAAACTTCAAGCATGGGAGTTGAAGTTCTTATCAAAGATTATTCATCTTAGGAAGTTAGAGGAGATGTGGCTAAAGAAATTTCTTGGCTGTACAGCAATTGTTAGATTTCTCTTCTTCAATGCTCCGACGTTTATTGCTGTGGTAACTTTCGGTTCATGTGTTCTTCTAAGCATCCCACTTGAATCGGGAAAGATCTTATCCGCTCTTGCAACATTCAGACTTCTTCAAATGCCTGTCTATAATCTTCCAGATACAATTTCAATGATTGCACAAACCAAGGTTTCTCTAGTTAGGATTGTCGCATTTCTTCGCTTAGATGATTTGCAGGCTGATGTAGTGGAGAAGCATCCACGAGGTAGTTCTGATATAGCAATTGAAATAGTAGACGGGAATTTCTCTTGGGAATTATCTTCTGCCAATACAACATTGAAAAACATAAATCTTAGAGTTTTTCAAGGCATGAGGGTTGCTGTTTGTGGTACGGTAGGATCAGGCAAGTCGAGTTTAATTTCTTGTATAATTGGTGAAATACCGAAGATATCTGGGATCCTGAAGGTTTGTGGAACAAAGGCTTATGTTGCTCAATCGCCGTGGATACAGAGTGGCAAGATAGAAGATAATATACTATTTGGTAGAGAGATGGATAGGGATAAGTATGAGAAGGTTCTAAAAGCTTGTTCATTGAAGAAAGACCTCGAGGTTTTACCATTTGGTGATCAGACCATTATTGGAGAGAAAGGGATCAATTTGAGTGGTGGACAGAAACAAAGAGTACAAATCGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTCGATGATCCCTTTAGTGCAGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAAAACAAAAACTGTGGTATATATAACACATCAAGTAAAGTTCTTGCCTGATTCTGATCTGATACTTGTCATGAAAGAAGGAAGGGTAACACAATCAGGAAAATACAATGACATTCTTACATCAGGAACTGATTTTATGGAACTTGTAGGCGCACATAGAGCAGTGTTGTCTTCAGTTAAGTCCTTAGAGAGAAGGAATACATTTAAAAAATCGAGTATTACCGAGGAAGACACAGTTTTATCAAGTGATTTTGAACTCGAGCAAGAAGTGGAAAACATAGATGATCGAAAAGGAAAGTTAGACGACACAGTTGAGCCAAAAGGACAACTTGTTCAAGATGAAGAACGAGAAAAGGGAAGAGTTGAGTTTAAAGTGTTCTGGAAATACATCACAACAGGTTATGGAGGAGCTCTGGTACCTGTTATATTTCTTTCACAAATACTCACTGTGGTTTTACAGATTGCAAGCAATTATTGGATGGCTTTGGCAACTCCTGTTTCAGCAACCGCGGAACCTGATATTGGAAATCTTACTCTTATGGTTGTCTATGTTTCTCTGGCGGTTGGAATTTCCTTTTCCACCTTTGCTAGAGCAGGTTTTGTTGTGATAGCTGGATACAAGGCTGCCGCAATGCTCTTCAATCAAATGCATTTGAGCTTTATTCGAGCACCAATGTCGTTTTTTGATGCCACCCCAAGTGGAAGAATTCTTAATAGAGTTTCAACAGACCAAAGTGCACTAGATATGAGCATTCCAAATGTAGCATGGGGATTTATCTACAGTCTTGTTCAGCTGTTGGGAACTGTTGCTGTGATGTCTCAAGTTGCATGGCAGGTGTCGATAGTATTGATTCCTGTCATGGCAGCTGGCATATGGTACCAGCGATACTACTCTTCATCAGCACGTGAGTTATCACGATTAACTGGTATATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACTATAAGAAGTTTTGAGAAAGAATCAAGATTTCATGAAATGAATATGCAATTGATAGACAAATATTCGCAACCTAAATTATACACTGCTAGTGTAGTGGAATGGCTTAGTTTCAGATTGGATCTTTTATCGTCTACACTATTTGCCTTCTACTTGGTTTTCTTGGTATATTTTCCAAAATCAATTGCTTATCCTAGTATTGCGGGATTGGCTGTAACATATGGGATTAACCTAAATGCCGTACAATCTAACTTAATTTCGTATCTTTGCAATTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCTATCCCAAGTGAAGCACCTCTTGTAATAAAAGACAGCCGACTAGATCATTCTTGGCCATCATTTGGAGAGATTCGTATTCAGGATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTTTTACGCGGACTCACTTGCACTTTTACTGCTGGAGCGAAAACAGGCATTGTGGGAAGAACAGGAAGTGGAAAATCAACACTAGTGCAAGCACTTTTCAGACTTGTTGAACCTGTTGCAGGAAAAATATTGATAGATAACATCAATATCTCATTGATCGGAATTCATGATTTGCGATCCAGACTAAGCATAATTCCTCAAGATCCAACGATGTTTGAAGGGACTGTAAGAAGTAACCTCGATCCGCTCGAAGAGTACACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGTGATGAAGTGAGAAAGAAAGAAGGAAAGCTTGACTCAACGGTGACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAGTTAGTGTGCCTCGGCCGTGTTCTCCTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCAACTGCATCAGTTGATACAGCTACCGATAATATTATTCAGAAAACAGTTAAACAACATTTCTGTGATTGCACAGTCATTACCATTGCTCATAGAATCACTTCAATCCTCGATAGCGACATGGTTCTGTTTCTCAGTGAAGGGCTTATTGAGGAATATGATTCACCAAAGAATTTGCTTAAGGACAAATCCTCATCTCTTGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAGCACTGGTTTTGGAAGTTGA 3921 0.391 MTKLAPLEETLLNGEASVSNNNSDSKKTLRNEISTSYSNAGFFSILTFSWMTPLIALGNQKTLDHEDLPLLSTNDSAYGTFSTFRNKLEMECGNVRNVTTINLAKVLFFSTWQGILISGFFALLYTCASYVGPYLIDNLVQYLNDENKVKNEGYILAMMFVGAKLVECLSQKHWMFKFQQVGVRMQSMLVSLIYAKGLTLSCKSKEGYSSGEIINLMTVDVERIGEFCWYMHEPWRAVLQVSLALFILHRSVGAASVAAFAATVVVMLLNHPMASLQEKFQGKLMEFKDKRMKATSEILMNMRILKLQAWELKFLSKIIHLRKLEEMWLKKFLGCTAIVRFLFFNAPTFIAVVTFGSCVLLSIPLESGKILSALATFRLLQMPVYNLPDTISMIAQTKVSLVRIVAFLRLDDLQADVVEKHPRGSSDIAIEIVDGNFSWELSSANTTLKNINLRVFQGMRVAVCGTVGSGKSSLISCIIGEIPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGREMDRDKYEKVLKACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLKTKTVVYITHQVKFLPDSDLILVMKEGRVTQSGKYNDILTSGTDFMELVGAHRAVLSSVKSLERRNTFKKSSITEEDTVLSSDFELEQEVENIDDRKGKLDDTVEPKGQLVQDEEREKGRVEFKVFWKYITTGYGGALVPVIFLSQILTVVLQIASNYWMALATPVSATAEPDIGNLTLMVVYVSLAVGISFSTFARAGFVVIAGYKAAAMLFNQMHLSFIRAPMSFFDATPSGRILNRVSTDQSALDMSIPNVAWGFIYSLVQLLGTVAVMSQVAWQVSIVLIPVMAAGIWYQRYYSSSARELSRLTGICQAPVIQHFSETISGSTTIRSFEKESRFHEMNMQLIDKYSQPKLYTASVVEWLSFRLDLLSSTLFAFYLVFLVYFPKSIAYPSIAGLAVTYGINLNAVQSNLISYLCNLENKIISVERILQYTSIPSEAPLVIKDSRLDHSWPSFGEIRIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQALFRLVEPVAGKILIDNINISLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQKTVKQHFCDCTVITIAHRITSILDSDMVLFLSEGLIEEYDSPKNLLKDKSSSLAQLVAEYTRRSSTGFGS 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04733 1306 Gene3D - 1043 1296 IPR027417 -
Mepo3g04733 1306 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 743 1023 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g04733 1306 Gene3D - 409 676 IPR027417 -
Mepo3g04733 1306 FunFam ABC transporter C family member 5 704 1041 - -
Mepo3g04733 1306 SUPERFAMILY ABC transporter transmembrane region 112 409 IPR036640 GO:0005524|GO:0016020
Mepo3g04733 1306 SUPERFAMILY ABC transporter transmembrane region 739 1042 IPR036640 GO:0005524|GO:0016020
Mepo3g04733 1306 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 116 396 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g04733 1306 SMART AAA_5 457 630 IPR003593 GO:0016887
Mepo3g04733 1306 SMART AAA_5 1086 1278 IPR003593 GO:0016887
Mepo3g04733 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 652 IPR027417 -
Mepo3g04733 1306 CDD ABC_6TM_ABCC_D2 741 1035 IPR044726 GO:0140359
Mepo3g04733 1306 Pfam ABC transporter transmembrane region 743 987 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g04733 1306 Pfam ABC transporter transmembrane region 115 384 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g04733 1306 FunFam ABC transporter C family member 10 99 412 - -
Mepo3g04733 1306 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524|GO:0016887
Mepo3g04733 1306 FunFam ABC transporter C family member 3 1043 1295 - -
Mepo3g04733 1306 Pfam ABC transporter 1078 1225 IPR003439 GO:0005524
Mepo3g04733 1306 Gene3D ABC transporter type 1, transmembrane domain 705 1041 IPR036640 GO:0005524|GO:0016020
Mepo3g04733 1306 Gene3D ABC transporter type 1, transmembrane domain 99 408 IPR036640 GO:0005524|GO:0016020
Mepo3g04733 1306 Pfam ABC transporter 448 582 IPR003439 GO:0005524
Mepo3g04733 1306 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 430 653 IPR003439 GO:0005524
Mepo3g04733 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1052 1285 IPR027417 -
Mepo3g04733 1306 CDD ABC_6TM_ABCC_D1 117 404 IPR044746 GO:0140359
Mepo3g04733 1306 CDD ABCC_MRP_domain2 1058 1278 - -
Mepo3g04733 1306 FunFam ABC transporter C family member 5 415 662 - -
Mepo3g04733 1306 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1060 1294 IPR003439 GO:0005524
Mepo3g04733 1306 CDD ABCC_MRP_domain1 430 630 - -
Mepo3g04733 1306 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 38 1294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04733 Mepo-Chr3 58981674 58987690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04733 430 853 Calmodulin-binding Proteins AT2G36910 24.632 1.14e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04733 - K05666 gmx:106794105 2018.82