Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04728 ATGGAAGGGGGTGTAAGTAGTAAAACTGAGAACTTTAATTGGGAAGTTATACTAAGAAATTATGAGAATGTTATAGCTTCAGGAACCAAATCTATGAAAATTAAAGCAATGTTGATGCTGGCCAAATACTCGAAAAAAGCCCCGGAACATGTATTATCCCCCACCATTCCAATTCTCATTGAGATTCTTTCTCATGATAGCATTGCAAATGATTCTGCTCCTAGTTTACTTCAAGAAGCTGCTGCTTATTGCTTGAAGTGTATTGCTTGCAGAGGTGAGGGTAGTTTGGCTATTGAAATGGGTGAACATGGTGTTGCGCGTTATTTCATAACGTTGTTGCCTTGTGCCGAGGGAAAGATGCAAAAAGTGTTGATAGAATGTTTGTTGGTTGTTGTAAGTTTTTGTGATAATAGTAGGACATTTGTTGCAGCTAATGGTGGTTTAGAGATTATTATCAGTTTGTTGAGTAGTTGTAGCAATGATGTTAGATTGTATTTGTTAGAGATTTTGAGTGCGTTGGCGCTTCGGATGGAAGTTAGGAAGGAACTCATTAGATTAGGAGCGCTTCGTTTTATTGTTGAGGCTGCTGGTGTTGGCAGCATGGTTTCGAGGGAAAGGGCGTGTCAATCGATTGGATTGGTTGGTCTTTCAAGACAAGGTAAGCTTATGCTTTTTGAATTGGGAGTGATACCCGTGCTTGTGGAGTTGTTTCGTGATGGAGATAATACTACAAAACTTGTGGCCGGTAATACTCTTGGTGTACTATTGAACCATGTTGATTACATCAGACCAATTGCTCAAGCTGGTGCTATACCTCTTTATGCTGAGCTTCTTCAAGGACATGATGTTTCTGGTAAGGAGATAGCCGAGGATGTGTTTTGTATATTGGCTGTTGCAGAGGCGAATGCTGTTGAAATTGTGGGTCACTTGGTGAGACTTCTTAGAGAAGGTGATGATGAAGCTAAAGCAGCAGCTGTCGATGTGATATGGGATATGTTGCGATACAAGCACGCACCTTCTGCGATTCGGGATTCAGGTGCGGCTTATATCCTTGTTGAGTTGTTGAGCCATGGGACTGAAGAAATAAAGAAAAAAATTTCTGGGGCTTTTTCTCAGATGAGCTATCAAGAAGGTGGTAGAATGGTCCTTGGTGATGCAGGAGCAATTCCGGTTCTCATTGACTCACTACATGACGAGACTGGGGAACTAAGGGATAATGTGGTTGAGGCTCTTTCTAATTTTCATGAGGATCCATTGTATCATGATACATTATCTGATGTAGTTAATGCTCCTTCATTCAGAATTTTGCAGAATAGACTAACTCCTCTTCGTGCAACGAGCGAACATATAACTAGATCGTTACGTAGAATGAGTATTGAGTAG 1383 0.4085 MEGGVSSKTENFNWEVILRNYENVIASGTKSMKIKAMLMLAKYSKKAPEHVLSPTIPILIEILSHDSIANDSAPSLLQEAAAYCLKCIACRGEGSLAIEMGEHGVARYFITLLPCAEGKMQKVLIECLLVVVSFCDNSRTFVAANGGLEIIISLLSSCSNDVRLYLLEILSALALRMEVRKELIRLGALRFIVEAAGVGSMVSRERACQSIGLVGLSRQGKLMLFELGVIPVLVELFRDGDNTTKLVAGNTLGVLLNHVDYIRPIAQAGAIPLYAELLQGHDVSGKEIAEDVFCILAVAEANAVEIVGHLVRLLREGDDEAKAAAVDVIWDMLRYKHAPSAIRDSGAAYILVELLSHGTEEIKKKISGAFSQMSYQEGGRMVLGDAGAIPVLIDSLHDETGELRDNVVEALSNFHEDPLYHDTLSDVVNAPSFRILQNRLTPLRATSEHITRSLRRMSIE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04728 460 Gene3D - 19 258 IPR011989 -
Mepo3g04728 460 SUPERFAMILY ARM repeat 13 422 IPR016024 -
Mepo3g04728 460 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 310 426 - -
Mepo3g04728 460 SMART arm_5 335 375 IPR000225 GO:0005515
Mepo3g04728 460 SMART arm_5 258 298 IPR000225 GO:0005515
Mepo3g04728 460 SMART arm_5 299 334 IPR000225 GO:0005515
Mepo3g04728 460 SMART arm_5 376 416 IPR000225 GO:0005515
Mepo3g04728 460 SMART arm_5 217 257 IPR000225 GO:0005515
Mepo3g04728 460 SMART arm_5 135 175 IPR000225 GO:0005515
Mepo3g04728 460 Gene3D - 259 441 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04728 Mepo-Chr3 58899763 58901327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04728 233 418 U-box Gene Family AT2G23140 29.744 1.09e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04728 - - gmx:100819735 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04728 3 58899763 58901327 Mepo3g04728 3 58899763 58901327 ECH