Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04725 ATGCAAACATCTCAGAATCATGAAATTTCTTACGGCTCTGACAGGTTCTACGTTGAGCCTGTTCAGAATCTCGAGTCGTATTGCTTACCCTCAATTGAGAATCTAGACAATTATTCTTCCTCTGATAACAGCTGCCAAACATTCTATCCTTCTCATCAAACTCTAGAACAATGTAACACCCTTGAATCTGCTTCAACAAGCAACAACAGTTTACCTTACCAAAATTCTCCCTCAACTCACGGTTTCTCACCTAACAATAGTCCAGGTTCTACGTTAAGGCCGCAGCATTCACTTGAATTTGTCAATGGTTCACCTGAGGAGGAGGATTCTTACTTGACATATCATGACCATGATGACCTAAGGCATAAGATGAGTGAGCTGGAATCTGTTATGCGAGGACCTAACGTAGAGATGCTAGAGATGTATGATACCAAAGTTCAAGAAGAATCTACTTCGTTCTTATTAGAGGCAGAGAAGTGGAAGAAAAACATGGAGATGGTATCTAGAGGTGATTTGAAAGAGATGCTTTATAATTGTGCAAAAGCAGTGGATGTGAATGATATGGAGACAATTGAATGGATGGTAACTGAGTTACGCAAAATAGTATCCGTTTCAGGCAGTCCAATTGAACGATTGGGAGCGTACATGTTGGAAGCACTTGTTTCAAGGCTTGCCTTTTCTGGAAGTACAATCTACAAATCGTTAAAATGCAGTGAGCCTACTGGTAATGAACTACTTTCCTACATGCATGTACTTTATGAAATATGTCCGTACTTTAAATTCGGATATATGTCTGCAAATGGAGCCATCGCGGAAGCTATGAAAGAGGAAAATGAAGTCCATATAATTGATTTTCAGATTGGACAAGGAACTCAGTGGGTGAGTCTAATCCAGGCTCTTGCTCGCCGCCCTGGAGGACCTCCAAAGATTAGAATAACAGGTATTGATGACTCTTATTCATCTAATGTCCGCAGTGGGGGCGTTGATATAGTAGGGGAAAAGTTATTGATGCTTGCGCAGTCATGTCATGTATCCTTTGAGTTCCATGCTGTTAGTGTGTATCCTTCTGAAGTGCGACTCGAAGACTTTGAACTTCGACCTAATGAAGCTGTGGCGGTGAATTTTGCCATTATGCTACACCATGTACCAGATGAAAGTGTGAACATTCATAATCATCGTGACAGGCTGCTGCGATTGGCTAAGCACATGTCTCCTAAGGTGGTGACTCTAGTTGAGCAAGAATTCAACACCAATAACGCTCCGTTCTTGCAGCGTTTCCTCGAGACAATGAACTACTATTCAGCCGTTTATGAATCGATTGATGTTGTTCTTCCAAGGGATCACAAAGAGAGGATTAATGTCGAACAACATTGTTTGGCTCGTGAAGTTGTGAACTTAGTAGCTTGCGAAGGGGAAGAAAGAGTGGAACGTCACGAGCTTCTGAGTAAGTGGAGAATGCGTTTCACGATGGCTGGATTTACGCCTTATCCATTGAGCTCCTTCATCAATTCTTCAATCAAGAATCTTCTTGAGAGCTACCGTGGACATTACACTCTAGAAGAGAGAGATGGTGCACTATATCTTGGTTGGATGAATCAAGATCTTATTGCTTCTTGTGCTTGGAGATGA 1629 0.4174 MQTSQNHEISYGSDRFYVEPVQNLESYCLPSIENLDNYSSSDNSCQTFYPSHQTLEQCNTLESASTSNNSLPYQNSPSTHGFSPNNSPGSTLRPQHSLEFVNGSPEEEDSYLTYHDHDDLRHKMSELESVMRGPNVEMLEMYDTKVQEESTSFLLEAEKWKKNMEMVSRGDLKEMLYNCAKAVDVNDMETIEWMVTELRKIVSVSGSPIERLGAYMLEALVSRLAFSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEENEVHIIDFQIGQGTQWVSLIQALARRPGGPPKIRITGIDDSYSSNVRSGGVDIVGEKLLMLAQSCHVSFEFHAVSVYPSEVRLEDFELRPNEAVAVNFAIMLHHVPDESVNIHNHRDRLLRLAKHMSPKVVTLVEQEFNTNNAPFLQRFLETMNYYSAVYESIDVVLPRDHKERINVEQHCLAREVVNLVACEGEERVERHELLSKWRMRFTMAGFTPYPLSSFINSSIKNLLESYRGHYTLEERDGALYLGWMNQDLIASCAWR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04725 542 ProSiteProfiles GRAS family profile. 163 542 IPR005202 -
Mepo3g04725 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 135 537 IPR005202 -
Mepo3g04725 542 Pfam GRAS domain family 172 542 IPR005202 -
Mepo3g04725 542 MobiDBLite consensus disorder prediction 60 98 - -
Mepo3g04725 542 MobiDBLite consensus disorder prediction 60 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04725 Mepo-Chr3 58814418 58817829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04725 1 542 GRAS Transcription Factor Family AT1G50600 55.678 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo3g04725 GRAS 1.9e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04725 - - gmx:100785400 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04725 3 58814418 58817829 Mepo7g02879 7 39749142 39752199 PCT