Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04724 ATGGACACCGCCGGCGATACCCAATTCCGGCGACAATCTCCCGCCGGCGAAACGGAACACCATTCTGAAGATCCAAATCGAACCGGGTTATCTTCACGACCCGATTCTGTTTCTGACGGACCTACCACCTCTGGAGCTAGATACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCTAGGTCGCCGGTTTTAACGATTCCGCCGGGACTTAGTCCGACTTCGTTTCTTGAATCACCTGTTCTTCTCTCAAATATGAAGGTAGAACCTTCACCTACAACAGGCTCCCTTCCTAGGCTTCAACAAACAGAACATGGTTTTGTAACTTCTTCTACGTCTGCTGCGTTTCCTGTAACCTCTGCGTGCTTCAATTCTAATTCTGTTGACGACGGAAAATCCAGCTTCTTTGAGTTCAAACCGCACAGTAGATCAAATATGGTTCCTGCTGACTTTTACAACCATGCATGTGAACAATCTACTCAAAGAGACGGTCAAGGAAATGCTAAATCTTTTGTCTCGTTACCACTGGTCAAAAGTGAAACGGCAGTCCCTTCAGATGAAATAAGTCTATCATCATCACCTGTTCAAATGATTAGTTCAGGGGCTAGTGCTCATGTTGAAGTCGATTTGGACGAATCAAATCCCAGTGGAAGCAAAGCAACTGGGCTTCAAGTATCACAAGTTGATGGTAGGGGTAGTGGACTTTCAGTTGCTGCCGATAAGGCATCTGATGATGGATATAATTGGCGAAAATATGGGCAGAAGCTTGTTAAAGGATGTGAATTTCCACGCAGTTATTACAAATGCACACATCCTAACTGTGAAGTGAAGAAACTCTTTGAACGCTCTCATGACGGCCAAATTACTGAGATTGTTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGCCGTCGATTCTCTGGTGGAAATATGATGTCTGTGCAAGAAGAAAGATCTGATAGGGCTTCTTTGACTAGCCGAGACGACAAAGGCTTTAATAATTATGGTCAGGTGTCTCATGCAGCTGAGCGTGACAGTACTCCTGAGCTATCGCCTATAGCAGCAAATGATGGTAGTCCAGAGGGTGCAGGGTTTTTGTCAAACCAGAATAATGACGAGGTTGATGAAGATGATCCTTTCTCAAAGAGAAGAAAAATGGATCTTGACATCACACCTGTAGTTAAGCCTATCCGGGAGCCACGGGTCGTTGTACAAACTCTGAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAATATGGGCAGAAGGTGGTAAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCAGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCGAAAGCTGTGATAACAACATACGAGGGTAAACACAATCATGATGTACCAACTGCAAGGCATAATAGTCATGACATGGCAGGACCGTCAGCTGCAGGTGGACAGACAAGAATCCGACAAGAAGAAAGTGATACTATTAGCCTTGACCTTGGAATGGGCCTCAGCCCAACCGCCGAAAATAGACCAAACAGTCTAGGGAGAATGATGCGCAATGAATATGGCGACAGCCAAACACATAACGGCAATTCCAGTTTCAAGTTTGTTCATAGTTCTACACCACCTCCGGTATACTTTGGTGTACTAAATAACAGCGCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAGTTCATCTTTAAACCGTTCTGCTTATCCTTGCCCACAGAACATGGGAAGAATAATTATGGGTCCCTAA 1788 0.4491 MDTAGDTQFRRQSPAGETEHHSEDPNRTGLSSRPDSVSDGPTTSGARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQTEHGFVTSSTSAAFPVTSACFNSNSVDDGKSSFFEFKPHSRSNMVPADFYNHACEQSTQRDGQGNAKSFVSLPLVKSETAVPSDEISLSSSPVQMISSGASAHVEVDLDESNPSGSKATGLQVSQVDGRGSGLSVAADKASDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRFSGGNMMSVQEERSDRASLTSRDDKGFNNYGQVSHAAERDSTPELSPIAANDGSPEGAGFLSNQNNDEVDEDDPFSKRRKMDLDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARHNSHDMAGPSAAGGQTRIRQEESDTISLDLGMGLSPTAENRPNSLGRMMRNEYGDSQTHNGNSSFKFVHSSTPPPVYFGVLNNSANPYGSRENPSDSSSLNRSAYPCPQNMGRIIMGP 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04724 595 MobiDBLite consensus disorder prediction 291 384 - -
Mepo3g04724 595 SUPERFAMILY WRKY DNA-binding domain 240 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 MobiDBLite consensus disorder prediction 29 45 - -
Mepo3g04724 595 MobiDBLite consensus disorder prediction 564 583 - -
Mepo3g04724 595 FunFam WRKY transcription factor 33 401 467 - -
Mepo3g04724 595 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 Pfam WRKY DNA -binding domain 415 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 505 IPR044810 GO:0003700
Mepo3g04724 595 MobiDBLite consensus disorder prediction 564 588 - -
Mepo3g04724 595 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g04724 595 ProSiteProfiles WRKY domain profile. 409 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 MobiDBLite consensus disorder prediction 13 28 - -
Mepo3g04724 595 SUPERFAMILY WRKY DNA-binding domain 406 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 Gene3D WRKY domain 234 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 Gene3D WRKY domain 399 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 FunFam WRKY transcription factor 233 302 - -
Mepo3g04724 595 SMART WRKY_cls 414 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04724 595 MobiDBLite consensus disorder prediction 475 497 - -
Mepo3g04724 595 ProSiteProfiles WRKY domain profile. 237 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04724 Mepo-Chr3 58806192 58813158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04724 51 595 WRKY Transcription Factor Family AT4G26640 56.318 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g04724 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04724 - - gmx:100781491 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04724 3 58806192 58813158 Mepo3g04724 3 58806192 58813158 ECH
Mepo3g04724 3 58806192 58813158 Mepo7g02877 7 39740667 39745321 PCT