Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04720 ATGCCAAGTGTTCAACAAAATCCATCCCACAAAGACACAGAAACATTTGTTGAAACTGATCCAACCGGAAGATATGGAAGATACGATGAATTACTTGGAGCTGGTGCTTGTAAAAAAGTCTATAAAGCATTTGATAATGAAGAAGGAATAGAAGTTGCATGGAATCAAGTTAAGCTCAGAAATTTCAGCAATGACCCTGCAATGATCGAAAGACTTTACTCTGAAGTGAGACTGCTTAGAAACATGACAAACAAAAACATCATTGCACTTTACAATGTTTGGAGGGATAAGGATCATAACACACTGAATTTCATCACTGAGGTTTGTACAAGTGGGAATTTGAGGGAGTATAGGAAGAAACATAATCATGTTTCTATTAAGGCTTTGAAGAAGTGGTCTAAGCAAATTTTGGAAGGGTTGAATTATTTGCATGTTCATGATCCATGCATCATTCATAGAGACCTCAATTGCAGTAATGTTTTTATCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTAGGATTGGCGGCAATCGTGGGAAAGAACCACTCAGCACATTCAATTCTAGGCACACCAGAATTTATGGCACCGGAACTATATGAAGAGGATTACACAGAAATGGTAGACATATACTCATTTGGAATGTTAGTATTAGAGATGGTGACACTTGAAATTCCATATAGTGAATATGACAATGTTGCAAAGATATACAAGAAGGTGACTTCAGGTGTGAGACCACAATCCTTGAACAAGATAAAAGATGCTGAAGTGAAGACTTTCATCGAAAAGTGTCTTGCTCAATCAAGGGCTAGACCTTCTGCTGAGGAATTGCTAAAGGATCCTTTTTTTGATGATGTAGAGTACGATGAAAACGACGATGTTGATTACTAA 894 0.3736 MPSVQQNPSHKDTETFVETDPTGRYGRYDELLGAGACKKVYKAFDNEEGIEVAWNQVKLRNFSNDPAMIERLYSEVRLLRNMTNKNIIALYNVWRDKDHNTLNFITEVCTSGNLREYRKKHNHVSIKALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFINGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEEDYTEMVDIYSFGMLVLEMVTLEIPYSEYDNVAKIYKKVTSGVRPQSLNKIKDAEVKTFIEKCLAQSRARPSAEELLKDPFFDDVEYDENDDVDY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04720 297 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
Mepo3g04720 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04720 297 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g04720 297 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Mepo3g04720 297 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
Mepo3g04720 297 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04720 297 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Mepo3g04720 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 286 - -
Mepo3g04720 297 PIRSF TyrPK_CSF1-R 81 280 - -
Mepo3g04720 297 PIRSF TyrPK_CSF1-R 27 130 - -
Mepo3g04720 297 CDD STKc_WNK 24 284 - -
Mepo3g04720 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04720 Mepo-Chr3 58784601 58785664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04720 11 287 MAP Kinase Kinase Kinase AT5G55560 79.783 3.07e-174 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo3g04720 Pkinase 2.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04720 K08867 - gmx:100782039 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04720 3 58784601 58785664 Mepo3g04720 3 58784601 58785664 ECH
Mepo3g04720 3 58784601 58785664 Mepo7g02874 7 39711366 39713771 PCT