Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04683 ATGGCATCTTCTTCAGACTCATGGTTGAAGGAATATAATGAAGCAATGAAACTTGCCGATGATATCAGTGGCATGATTTCTGAACATAATTCATTTGCCTCATCTGGACCAGAAACACAACGTCATGCATCTGCTATAAGAAGGAAAATCACAATATTGGGGACCCGACTAGATAGCTTGCAATCCCTTTTGTCAAAGCTCCCTGTAAAGTCTGAGAAAGAGATGAATCGTCGCAAGGACAACCTTGCAAATTTGAGGTCAAAGGTTAACCAAATGGCTTCAACTTTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTCGGGCCAGAAATTAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAATGGACTTGTTGGTCTGCAACGGCAAGTTATGAAAGAACAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTATTGAGTACAAAACATATTGCGTTGGCAGTGAATGAAGAGCTGACTCTACACACTAGACTCATTGATGACTTGGACGAACATGTAGATGTCACAGATTCTCGGCTGCGGAGAGTGCAGAAGAACTTGGCAATTTTAAACAAACGTACCAAGGGAGGTTGCTCATGCATGTGCATGCTATTAGCAGTGATTGGTATAGTGGGTTTGGTTCTTGTCATATGGCTTCTGGTCAAATATTTGTAG 690 0.4203 MASSSDSWLKEYNEAMKLADDISGMISEHNSFASSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRTVGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKNLAILNKRTKGGCSCMCMLLAVIGIVGLVLVIWLLVKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04683 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Mepo3g04683 229 SMART tSNARE_6 128 195 IPR000727 -
Mepo3g04683 229 Gene3D - 134 197 - -
Mepo3g04683 229 CDD SNARE_Qc 136 193 - -
Mepo3g04683 229 PANTHER SYNTAXIN 34 213 IPR045242 -
Mepo3g04683 229 FunFam syntaxin-51 isoform X2 135 197 - -
Mepo3g04683 229 Pfam SNARE domain 170 221 IPR000727 -
Mepo3g04683 229 SUPERFAMILY SNARE fusion complex 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04683 Mepo-Chr3 58259661 58263807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04683 1 229 SNARE and Associated Proteins AT1G79590 74.678 2.30e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04683 K08503 - gmx:100794038 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04683 3 58259661 58263807 Mepo3g04683 3 58259661 58263807 ECH
Mepo3g04683 3 58259661 58263807 Mepo7g02848 7 39400512 39401142 PCT