Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04647 ATGGGTCGTGGAAACGGCGCAACCGCAACAACAGCGGCTGAACCCGGTTCAAACCCGGTTTTTTTCAAAGAGCCGAGATATCGTGGTGTTAGAAAAAGACCGTGGGGACGGTTCGCCGCCGAGATCAGAGACCCTTTGAAGAAAGCAAGAGTTTGGCTCGGAACGTTCGACACGGCGGAACAAGCGGCGCGTGCATATGACACCGCCGCTAGAAACCTCCGTGGACCTAAAGCAAAGACGAATTTTCCTCTTCAACAGCCTTTTTACCATAATCTTGACGCAGGAGATCCGTTTTCCGATCAACGTTTCTTAACCGGCGCCGGTGCCGGAGTTGTTGCCGGCGAGTATCAAGATCATCGGAGACCTACTTCATCTGGCATGAGCAGCACAGTTGAATCTTTCAGCGGTCCACGTCCAGTTCTTCCACCGGCGCTGCCGTCGGTGGTGGCCGGCAGAAGATACCCACGTACACCGCCGGTTGCACCAGAGGATTGCCGGAGTGACTGTGATTCATCATCTTCCGTTGTCGATGACGGCGACAACGACAACGCGGCTTCGTCGGTGATGCTTTCGTTTAAACGCGCTCCTCTGCCGTTTGATCTCAACGCGCCGCCGTTGGAGGATGCTGACGTGGCAGGTGATGAGGATCTGCACTGCACTGTTCTATGCCTCTGA 675 0.5511 MGRGNGATATTAAEPGSNPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEQAARAYDTAARNLRGPKAKTNFPLQQPFYHNLDAGDPFSDQRFLTGAGAGVVAGEYQDHRRPTSSGMSSTVESFSGPRPVLPPALPSVVAGRRYPRTPPVAPEDCRSDCDSSSSVVDDGDNDNAASSVMLSFKRAPLPFDLNAPPLEDADVAGDEDLHCTVLCL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04647 224 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Mepo3g04647 224 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mepo3g04647 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 182 - -
Mepo3g04647 224 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Mepo3g04647 224 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Mepo3g04647 224 MobiDBLite consensus disorder prediction 121 135 - -
Mepo3g04647 224 MobiDBLite consensus disorder prediction 167 182 - -
Mepo3g04647 224 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g04647 224 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Mepo3g04647 224 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Mepo3g04647 224 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Mepo3g04647 224 MobiDBLite consensus disorder prediction 118 182 - -
Mepo3g04647 224 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mepo3g04647 224 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04647 Mepo-Chr3 57910186 57911645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04647 1 224 AP2-EREBP Transcription Factor Family AT3G20310 54.618 3.01e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo3g04647 AP2 5.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04647 K09286 - gmx:100782025 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04647 3 57910186 57911645 Mepo3g04647 3 57910186 57911645 ECH