Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04629 ATGAACAACAACAACTCTTCTTCATTCGGTTCTATTCCTCCTTCTCCCGCTTCTTCCAACTCATCCTCGATGGCTTCTTCTGAACAACTCGTTCTCGAACTCAGCAATCCCGAACTCCGTGAAAATGCTCTTCTCGAACTCTCTAAGAAGAGGGAGCAATTTCAAGATCTCGCCCCATTGCTATGGAATTCATTTGGTACTATTGCAGCACTTCTGCAGGAAATTGTTTCAATATACCCTGTTTTGTCTCCTCCCAACCTCACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCCCTGCTCCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTGAATGCGCACATTCCTCTGTATTTGTATCCGTTCCTGAACACAACAAGCAAATCGAGACCTTTTGAGTACTTGAGGCTTACTAGTCTTGGTGTCATCGGTGCATTAGTGAAGGTTGATGATACTGAGGTTATTAGTTTTCTGCTTTCGACTGAAATAATTCCCCTGTGCCTGCGCACTATGGAGATGGGGAGTGAGCTCTCCAAAACGGTTGCAACGTTTATTGTTCAAAAGATTCTGTTAGACGATGTGGGCTTGGACTATATTTGTACTACAGCTGAGCGCTTTTTTGCTGTTGGTCGAGTTCTTGGAAACATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGTTGAAGCATATCATTCGATGCTATCTTCGTCTGTCAGATAACCCGAGGGCTTGTGATGCATTAAGAAGCTGTCTTCCGGACATGTTAAGGGATGCTACATTCAGCAGCTGCCTCCGTGAGGACCCAACAACTAGGAAGTGGCTGCAACAACTGATTCACAATGTTGGAGGGAATCGGGTTCCTGCACTGCAAGGTGGAGGAGGTTTTGATCATCTAATGGTGAATTGA 927 0.4563 MNNNNSSSFGSIPPSPASSNSSSMASSEQLVLELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRKWLQQLIHNVGGNRVPALQGGGGFDHLMVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04629 308 Pfam Cell differentiation family, Rcd1-like 30 288 - -
Mepo3g04629 308 FunFam Cell differentiation protein RCD1 23 291 - -
Mepo3g04629 308 Gene3D - 19 289 IPR011989 -
Mepo3g04629 308 PANTHER UNCHARACTERIZED 21 291 IPR007216 GO:0006402|GO:0030014
Mepo3g04629 308 SUPERFAMILY ARM repeat 32 262 IPR016024 -
Mepo3g04629 308 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04629 Mepo-Chr3 57544338 57551856 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mepo3g04629 Rcd1 1.1e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04629 K12606 - gmx:100792784 553.518