Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04614 ATGTCCCCTTCACCATCACAAACAAGGGCGGTTCTAAGGCCCGGCGAGCCTGAGCAGTTGTCCAGACTCCGGCCCAAACAAATCTTCATACCTTTTCTCATCTTTCTCTTCCATTTTCAACACACCTCATCCTTCACCCTCTCAGTAGAAAACCCTGAACAAAACATCATACTCTCCTCCAAAAAAACCTTCACAGCAGGTTTCTACCCTGTAGGACAAAATGCTTATTCCTTTGCCATATGGTTCACACAAAAACATAAAAACCTTAACAACACCACCATTGTTTGGATGGCAAATCGTGACCAACCTGTTAACGGAAAACGCTCAACACTTTCCCTTCTCAAAACCGGAAACCTCGTCTTAACAGATGCAGCTCAGTCCATTGTTTGGTCCACAGACACCACCTCAACAAAACCACTTGAACTACTATTACATGAAACAGGTAACCTTGTTCTTCAAGAACAAAACACTAATGATTCGAAAGAAAACATTCTATGGCAAAGTTTTGACTTCCCAACAGATACACTTTTACCAGACCAAACCCTAACGAGGTTCGCGAACCTCGTTTCATCAAGAAGTCAGACGAACTATTCGTCTGGCTTCTACAAACTATTTTTTGACAATGATAATGTTCTTCGTCTTTTATACCAAGGACCGACAGTTTCTAGCATTTATTGGCCAGATCCTTGGACTACAAGCAATGGTGCTACTGGTAGTGGTACAAGAAGTACTTACAATAGTAGTAGAATCGCGTCGTTGGATTCCTTTGGTAGTTTTAGTTCATCTGATGATTTTGTTTTTAATACTGCTGATTATGGAACTTTTTTGCAACGTAGACTTACACTTGATCATGATGGTAACGTTCGCATTTATAGTAGAAAAGATGAGGAACATGGTTGGTTTGTTTCGGGTCAATTTCGTCAACAACCTTGTTTTATTCATGGGATTTGTGGGCCTAATAGTACTTGTAGTAATGATCCTTTGACTGGTAGAAAATGTTCTTGTCTACCTGGTTATGTTTGGATTAATGATCAAGATAGTTCTCAAGGTTGTAGACCCAATTTTGAACTTTCTTGTAGTAACAAGACTCATGATGAGTTAAGTTTTTTGGCTTTGTCTCATGTTGATTTTTATGGATATGATTATGGGTTTTATACAAATAAAACTTACAAAGAATGCGAGACTTTGTGTGCACAATTGTGTGATTGTGCAGGATTTCAGTATACTTTTACAGCTGAATATGGTGGTGTTTATTGGTGTTATCCGAAAATTCAGTTACTTAACGGTCATAGTTCGCAGAGTTTTCTTGGATCATTCTACTTGAAATTGCCGAAAAGTAGTGGTTTTGTTGATGAGATTAGGATTCAACAAAATAGCAGTGGAATGGTTTGTGAGAGGAATGGAGTGGAATACATGAAGAAGAAAGAAAATGGTTCATTGAAGTTCATGCTTTGGTTTGCAGGTGGTTTCGGAGGAGTTGAGCTTTTGGGATTTTTTATGGTTTGGTTCTTCTTGTTTAGGAGTAGCAAAAATTCTGATGAGAATCATGATTATGTTCTAGCAGCAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATCGGAAGAGGTGCCGGAGGAACTGTGTATAAAGGTGTTTTATCTGATAATCGAGTTACTGCGATAAAGCGTCTGCATGAAGCAAATGAAGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGTATGTGGGGTTATTGTGCTGAGGGAAAGCATAGATTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTCATCAAATGAACTTGATTGGGGTAAAAGGTACAACATTGCTATGGGAACTGCGAAGGGTCTTGCGTATTTACACGAAGAATGTTTGGAGTGGATTTTGCATTGCGATATAAAGCCGCAAAATATACTTGTTGACTCTGATTACCAACCGAAGGTAGCGGATTTTGGTTTGTCTAAGCTATTGAATAGGGATGACCTTGATAATTCAAATTTCTCGAGGATTCGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACATGCAAATCACTTCTAAGGTTGATGTTTATAGCTATGGAGTTGTGATGTTGGAGATGATTACCGGAAAGAGTCCAACAACCGGTATCCAAATCAAAGATAAAGAAGAGTTGTGTCATGAGAGATTGGTAACATGGGTTAGGGAGAAAAGAAGAAAAGGACTAGAAGTTGGTTGTTGGGTAGAACAAATTGTTGATCCTAAATTGGGATCAAATTATGATGTAAAGAAAATGGAGACTTTGGCAAATGTTGCTTTGGATTGTGTACAAGAAGATAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGGCTATTAAGGGATGACCATTATTATTGA 2475 0.3871 MSPSPSQTRAVLRPGEPEQLSRLRPKQIFIPFLIFLFHFQHTSSFTLSVENPEQNIILSSKKTFTAGFYPVGQNAYSFAIWFTQKHKNLNNTTIVWMANRDQPVNGKRSTLSLLKTGNLVLTDAAQSIVWSTDTTSTKPLELLLHETGNLVLQEQNTNDSKENILWQSFDFPTDTLLPDQTLTRFANLVSSRSQTNYSSGFYKLFFDNDNVLRLLYQGPTVSSIYWPDPWTTSNGATGSGTRSTYNSSRIASLDSFGSFSSSDDFVFNTADYGTFLQRRLTLDHDGNVRIYSRKDEEHGWFVSGQFRQQPCFIHGICGPNSTCSNDPLTGRKCSCLPGYVWINDQDSSQGCRPNFELSCSNKTHDELSFLALSHVDFYGYDYGFYTNKTYKECETLCAQLCDCAGFQYTFTAEYGGVYWCYPKIQLLNGHSSQSFLGSFYLKLPKSSGFVDEIRIQQNSSGMVCERNGVEYMKKKENGSLKFMLWFAGGFGGVELLGFFMVWFFLFRSSKNSDENHDYVLAATGFRKFSYSELKQATKGFSQEIGRGAGGTVYKGVLSDNRVTAIKRLHEANEGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLDNSNFSRIRGTRGYMAPEWVFNMQITSKVDVYSYGVVMLEMITGKSPTTGIQIKDKEELCHERLVTWVREKRRKGLEVGCWVEQIVDPKLGSNYDVKKMETLANVALDCVQEDKDVRPTMSQVVERLLRDDHYY 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04614 824 Pfam Protein kinase domain 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04614 824 PANTHER OS07G0415500 PROTEIN 32 817 - -
Mepo3g04614 824 FunFam S-receptor-like serine/threonine-protein kinase 507 614 - -
Mepo3g04614 824 CDD STKc_IRAK 544 819 - -
Mepo3g04614 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 229 IPR036426 -
Mepo3g04614 824 CDD B_lectin 57 172 IPR001480 -
Mepo3g04614 824 CDD PAN_AP_plant 355 444 - -
Mepo3g04614 824 SUPERFAMILY Protein kinase-like (PK-like) 516 817 IPR011009 -
Mepo3g04614 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Mepo3g04614 824 SMART blect_4 48 172 IPR001480 -
Mepo3g04614 824 Gene3D - 172 299 IPR036426 -
Mepo3g04614 824 Gene3D Phosphorylase Kinase; domain 1 504 614 - -
Mepo3g04614 824 ProSiteProfiles Protein kinase domain profile. 538 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04614 824 Gene3D Transferase(Phosphotransferase) domain 1 615 822 - -
Mepo3g04614 824 Gene3D - 43 170 IPR036426 -
Mepo3g04614 824 FunFam Serine/threonine-protein kinase 615 823 - -
Mepo3g04614 824 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Mepo3g04614 824 ProSiteProfiles Bulb-type lectin domain profile. 43 165 IPR001480 -
Mepo3g04614 824 PIRSF SRK 20 823 IPR024171 GO:0004674
Mepo3g04614 824 SMART serkin_6 538 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04614 824 Pfam S-locus glycoprotein domain 271 340 IPR000858 GO:0048544
Mepo3g04614 824 CDD EGF 310 339 - -
Mepo3g04614 824 Pfam D-mannose binding lectin 93 184 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04614 Mepo-Chr3 57307208 57310001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04614 528 817 Trihelix Transcription Factor Family AT5G38560 43.051 2.91e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo3g04614 Pkinase 5.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04614 - - gmx:100806357 1070.07