Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04601 ATGGAACACATGACAAATATTGTTGATGCAATAAATGATGAAAATCTGTTATTTGGTATGATGGAAAGAGGCAATGGCGGAGAGGGTGGCAGTAGTGGTGGTGGTGGTCGTGGTGGAGGTGGAGATGATACGAATTTGAAAAAGGGTCCTTGGACAACAGTAGAGGATACAATTTTGATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCTGTTCAAAGAAATACAGGTTTGAATCGTTGTGGGAAGAGTTGTAGGCTTAGATGGGCTAATCATTTAAGACCCAATTTGAAGAAAGGTGCATTTTCTCCTGAAGAAGTGAAACTCATTGTTGAACTTCATGCTCAATTTGGTAACAAATGGGCTCGAATGGCTGCTTTGTTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACAAGGATCAAACGTCGTCAAAGACAAGGGCTTCCTCTCTATTCAGACGAACACGATCGTCCCAACACACCAACCACACCTTCACCTTGTGTCACACCAACAGGAACAAACCATAACAACATTACACCAAAGTTTGAGTTTTTCAATCAAAACCACCACCAATATCAACAACAACAATATCAATACCTTCACCCTTTATCCCCAACATTAACTCATCATCATTCTCCTCTTTCTTCACCACTTCAACATAGACAACAACGACAACTTTCTTATTCTCCTCACACATTTACAGAGACTTCACCTGCATCATTGTCATCTTCTTCACCTTCACCGCTCTCTTTCACTTTCCAAAGACCTGCACCACTCTTATCTACACATTTTCGCTTCAAACGCTATCGTTCCAATCCCAACTTTAGTCTTCAAGTCCCTTCCATAACACAAAATTGCTCTGCTTCACTCCATGATCCTTCTTTAACCTCTCATCAAGATAGTTTCAGGTTCCCAATTCAATACGACTCGAGTTTTTCTCAATACTTTCATACTCCTTTGTTGGAATCCGATCGAGGGGTTTCTTCATCGTCTTCACCTTTCTCCACGAAGTTGGAGCTACCTTCAAACCAATATTCAAGACTATCATCAGAGCAAGATGTTAAGGTTAACAATATTGAGTTCAATGAGGCTAATTCTTTTCGAACCAATAATTGTGGCTTAATGGGAGATCTTTTGATGGATGCACATACACTAGCATCCGGTCAAAATTCAAAGAAAAGAAGTTACTTGAGCTTAAATGAAGAAAATGATATGTTTAATGGTTACCAAGGCCTAAATGATTTCCCACTTAGCTCTGTTTATTGGTCTTCTAATTCAGGACAAAAACCAAAGGAAGAAACACCAGACCTAAGCAAATTTATGAATGATGAAATGTCAACAATGCTAACTGTGATGCCTTCTTCTATGATGCAAATTCAGGATTGGAACAATAATAACAATAGAAATGCATCAGAAGTAACCAATGTTCAATCTTCTATTGGTGTGATGACAGATGAAAATTTTGGACTTGATATCAAGCCTATAGCTTCATTGTTTCCTCTCACAAACACAACAAATAGTAATGATGATAATAATAATGAAAACAATGGTTGCTACACTTGGGACAATTTACCTGAACTCTGTTAA 1605 0.3832 MEHMTNIVDAINDENLLFGMMERGNGGEGGSSGGGGRGGGGDDTNLKKGPWTTVEDTILIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEVKLIVELHAQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDEHDRPNTPTTPSPCVTPTGTNHNNITPKFEFFNQNHHQYQQQQYQYLHPLSPTLTHHHSPLSSPLQHRQQRQLSYSPHTFTETSPASLSSSSPSPLSFTFQRPAPLLSTHFRFKRYRSNPNFSLQVPSITQNCSASLHDPSLTSHQDSFRFPIQYDSSFSQYFHTPLLESDRGVSSSSSPFSTKLELPSNQYSRLSSEQDVKVNNIEFNEANSFRTNNCGLMGDLLMDAHTLASGQNSKKRSYLSLNEENDMFNGYQGLNDFPLSSVYWSSNSGQKPKEETPDLSKFMNDEMSTMLTVMPSSMMQIQDWNNNNNRNASEVTNVQSSIGVMTDENFGLDIKPIASLFPLTNTTNSNDDNNNENNGCYTWDNLPELC 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04601 534 MobiDBLite consensus disorder prediction 20 48 - -
Mepo3g04601 534 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Mepo3g04601 534 CDD SANT 103 144 IPR001005 -
Mepo3g04601 534 Gene3D - 42 101 - -
Mepo3g04601 534 MobiDBLite consensus disorder prediction 162 179 - -
Mepo3g04601 534 Gene3D - 103 205 - -
Mepo3g04601 534 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Mepo3g04601 534 MobiDBLite consensus disorder prediction 210 232 - -
Mepo3g04601 534 SUPERFAMILY Homeodomain-like 45 142 IPR009057 -
Mepo3g04601 534 FunFam Transcription factor GAMYB 103 149 - -
Mepo3g04601 534 CDD SANT 50 95 IPR001005 -
Mepo3g04601 534 SMART sant 47 97 IPR001005 -
Mepo3g04601 534 SMART sant 100 148 IPR001005 -
Mepo3g04601 534 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Mepo3g04601 534 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Mepo3g04601 534 MobiDBLite consensus disorder prediction 152 179 - -
Mepo3g04601 534 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Mepo3g04601 534 FunFam MYB-related transcription factor 47 100 - -
Mepo3g04601 534 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Mepo3g04601 534 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04601 Mepo-Chr3 57041926 57044866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04601 29 512 MYB Transcription Factor Family AT4G26930 37.090 1.83e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g04601 Myb_DNA-binding 5.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04601 - - lja:Lj6g3v0869180.1 600.897