Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04599 ATGTTTTCCACCACTCTCACAAATGGAAGAATCCCCTCAAAACCCCACTTTCCAAAACACTTCCAAATCCGTTGCGGAATACGCGAAATCCGCGACCGAATCAACAGCGTCAAAACAACTCAAAAAATAACCGAAGCTATGAAACTTGTCGCCGCCGCTAGAGTCCGTCGCGCACAAGAAGCCGTTATCAACTCCCGCCCCTTCTCCGAAGCCTTTGCCGAAACCCTCCATTCCATCAACCAATCCCTCCAAAATGACGACGTTGTCGTCCCTTTAACCGCCGTCCGCCCCGTTAAAACCGTCGCACTCATCGTCATTACCGGTGACCGTGGCTTATGTGGCGGATTCAACAACTCCGTCGCTAAAAAAGCCGAAGCCCGTGTCGCGGAATTGAAGAATCTTGGTATCAATTGTGTTGTTATTAGTGTTGGAAAAAAGGGTAGTTCTTATTTTAACCGTAGGAGTTTTGTGGAGGTTGATAGGTTTATCGACAATGTCGGTTTTCCGACCACAAAAGATGCACAAATTATTGCTGATGATGTTTTTTCGCTTTTTGTTAGTGAGGAAGTTGATAAAGTTGAACTTGTTTACACAAAGTTTGTTTCTTTAGTTAGGTTTAATCCAGTGATTCAAACGTTGTTACCATTGTCGAAAAAAGGCGAAGTTTTTGATGTGAATGGGAATAGTGTTGATGTTTTAGAAGATGAGTTTTTTAGGTTAACTTCAAAAGATGGAAAATTGGCTTTGAAGAGAGATGTGAAGAAGAAAAAAATGAAAGATGGGTGTGTTCCGGTTATGGAATTTGAGCAAGATCCTGCTCAGATTCTTGATGCAATGATGCCACTGTATTTGAATAGTCAAGTTTTGAAGGCATTGCAAGAATCATTGGCTAGTGAACTTGCTGCGAGAATGGGTGCAATGTCGAATGCTACGGATAATGCTGTTGAGTTAACGAAGGAGCTTTCTGTTGCTTATAATAGGGAAAGGCAAGCTAAGATTACTGGTGAGATTTTGGAGATTGTTGCTGGAGCTGAAGCATTAAGACCAATTGATTGA 1056 0.4214 MFSTTLTNGRIPSKPHFPKHFQIRCGIREIRDRINSVKTTQKITEAMKLVAAARVRRAQEAVINSRPFSEAFAETLHSINQSLQNDDVVVPLTAVRPVKTVALIVITGDRGLCGGFNNSVAKKAEARVAELKNLGINCVVISVGKKGSSYFNRRSFVEVDRFIDNVGFPTTKDAQIIADDVFSLFVSEEVDKVELVYTKFVSLVRFNPVIQTLLPLSKKGEVFDVNGNSVDVLEDEFFRLTSKDGKLALKRDVKKKKMKDGCVPVMEFEQDPAQILDAMMPLYLNSQVLKALQESLASELAARMGAMSNATDNAVELTKELSVAYNRERQAKITGEILEIVAGAEALRPID 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04599 351 FunFam ATP synthase gamma chain, chloroplastic 25 92 - -
Mepo3g04599 351 Gene3D - 90 218 - -
Mepo3g04599 351 PANTHER ATP SYNTHASE GAMMA CHAIN 19 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 CDD F1-ATPase_gamma 27 344 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 NCBIfam ATP synthase F1 subunit gamma 27 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 Hamap ATP synthase gamma chain [atpG]. 24 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 Gene3D ATP synthase, gamma subunit, helix hairpin domain 249 347 - -
Mepo3g04599 351 Gene3D ATP synthase, gamma subunit, helix hairpin domain 25 88 - -
Mepo3g04599 351 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 26 347 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 Pfam ATP synthase 27 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 FunFam ATP synthase gamma chain, chloroplastic 243 347 - -
Mepo3g04599 351 PRINTS ATP synthase gamma subunit signature 325 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 PRINTS ATP synthase gamma subunit signature 98 117 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 PRINTS ATP synthase gamma subunit signature 294 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 PRINTS ATP synthase gamma subunit signature 191 208 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mepo3g04599 351 ProSitePatterns ATP synthase gamma subunit signature. 333 346 IPR023632 -
Mepo3g04599 351 FunFam ATP synthase gamma chain 91 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04599 Mepo-Chr3 57019791 57021331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04599 5 348 Primary Pumps ATPases AT1G15700 71.304 4.01e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04599 K02115 - qsu:112000322 462.996