Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04595 ATGCCCTCAGCTCAGGATCCATTCTACGTTGTCAAATCCGAAATTCAAGAATCTATTGATAATCTGCAATCTACTTTTGAGCAATGGAAACGCACTTCTGATGCTGCAGAGAAAGTACGTGTTACGAAGGAGGTTCTTTCTGGATGTGAAAGCATAGAGTGGCAGGTGGATGAATTGGAAAAAGCAATTGCTGTTGCTGCTAGAGAACCTTCTTGGTATGGCATTGATGACGCTGAGATTGAAAATCGGAGGAGATGGACAAGCAGTGCTCGTACTCAGGTTGGCACAATGAAGAAAACAGTGGATGCTGGAAAGAGTTCAAGTACAACAAGCATTAATGGGATGCACCGAGAACTAATGAGGTTACCGGATTCCTATCAACCTTATGCATCCAACCAGAATGCTGCCAATGATAATGATGATTTCATTCAATCAGAATCAGATAGACAGACGCTTCTTATAAAGCAACAGGACGAGGAGTTAGATGAACTTAGTTTAAGCGTACAAAGAATTGGAGGCGTTGGACTCACCATACATGAAGAACTCCTTGCCCAGGAAAAGATTATAGATGAACTTGGTAATGAGATGGACAGTACATCAAATCGTCTAGATTTTGTCCAAAAAAAAGTGGCAATGGTTATGAAGAAAGCTAGTGCAAAGGGCCAGATCATGATGATATTGGCCTTGTTGGCCTTGTTCATTTTCCTATTTTTCTTAGTCTTCCTTACCTAG 732 0.4126 MPSAQDPFYVVKSEIQESIDNLQSTFEQWKRTSDAAEKVRVTKEVLSGCESIEWQVDELEKAIAVAAREPSWYGIDDAEIENRRRWTSSARTQVGTMKKTVDAGKSSSTTSINGMHRELMRLPDSYQPYASNQNAANDNDDFIQSESDRQTLLIKQQDEELDELSLSVQRIGGVGLTIHEELLAQEKIIDELGNEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILALLALFIFLFFLVFLT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04595 243 Coils Coil 12 39 - -
Mepo3g04595 243 FunFam syntaxin-61 isoform X1 154 215 - -
Mepo3g04595 243 MobiDBLite consensus disorder prediction 91 111 - -
Mepo3g04595 243 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Mepo3g04595 243 Coils Coil 49 69 - -
Mepo3g04595 243 CDD SNARE_NTD_AtSYP61-like 5 101 - -
Mepo3g04595 243 PANTHER GOLGI SNARE BET1-RELATED 112 239 - -
Mepo3g04595 243 SUPERFAMILY SNARE fusion complex 149 213 - -
Mepo3g04595 243 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Mepo3g04595 243 FunFam Syntaxin 10 3 104 - -
Mepo3g04595 243 Gene3D - 2 104 - -
Mepo3g04595 243 Gene3D - 158 222 - -
Mepo3g04595 243 CDD SNARE_Qc 154 211 - -
Mepo3g04595 243 Pfam SNARE domain 188 239 IPR000727 -
Mepo3g04595 243 Coils Coil 189 209 - -
Mepo3g04595 243 SMART tSNARE_6 146 213 IPR000727 -
Mepo3g04595 243 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 151 213 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04595 Mepo-Chr3 56980962 56985797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04595 55 243 SNARE and Associated Proteins AT1G28490 70.000 2.10e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04595 K08500 - gmx:100793612 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04595 3 56980962 56985797 Mepo7g02780 7 38833895 38838947 PCT