Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04585 ATGGGGTGTTTGTTAAGTAAAGACAAAGATTCAGAACCAGAACACAACAATGGTTATAGATATGCTCATGAACACAATCATAGGAACAATCATGAACAAGTCAACACATCAAGAACAGCACCAACAAGTTCTTATCAACCTCAAATACCAACCAAGCCTTCATCAATTTCTGCTCCAAGTCCAAAACCTCTTATCAAGCAAGACACAAACACAATCCTAGGAAAAGGTTTGGAAGATGTGAAGCAATTCTACACACTAGGTAAAGAATTAGGTAGAGGCCAATTCGGAGTAACGTTTCTATGCACCGAGAATTCAACTGGATTGCTTTATGCTTGCAAGTCAATTTCCAAGAGGAAACTTGTGAGTAAATCTGATAGGGAAGATATAAAGAGAGAGATTCATATCATGCAACATTTGAGTGGTCAACCAAATATTGTTGAGTTTAAAGGAGCTTATGAGGATAGGAATTCAGTTCATGTTGTTATGGAACTTTGTGCTGGTGGTGAACTTTTTGATAGGATTATTGCTAAAGGACATTATAGTGAAAAAGCTGCTGCTTCTATTTGTAGACAGATTGTTAATGTTGTGAATATTTGTCATTTTATGGGAGTTATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTGGCTAGTAAAGATGAAAATGCACTTCTTAAGGCTACAGATTTTGGTTTGTCTGTTTTCATTGAAGAAGGAAAGGTGTATCGCGATATAGTTGGGAGTGCTTACTATGTTGCTCCAGAAGTTCTTCGTCGCAGATGCGGGAAAGAAATAGATATATGGAGTGCAGGAGTTATACTATATATCTTACTTAGTGGTGTCCCTCCATTTTGGGCTGAGACTGAAAAGGGAATATTTGATGCAATATTGGAAGGTCATATTGATTTTGAAAGCGAACCATGGCCTAAAATTTCAGACAGCGCCAAGGATCTTGTTCGTAAAATGCTTATACAGGAGCCGAAGAAACGCATTACTGCTGCCCAGGTTCTAGAGCACCCTTGGATCAAAGATGGAAATGCTTCTGATAAGCCAATAGACAGTGCAGTTCTTTCAAGAATGAAGCAATTCAGAGCTATGAATAAACTAAAGAAACTTGCATTGAAGGTGATTGCTGAGAATATGTCTGAAGAAGAGATCCGAGGTTTGAAGGCGATGTTTACAAATATGGACACAGACAACAGTGGTACAATCACCTATGAAGAACTAAAAGCAGGATTACAAAGACTTGGCTCAAAGCTTTCAGAAGCTGAAGTTAAACAACTCATGGAAGCTGCTGATGTAGATGGAAATGGCACAATTGATTGCATTGAATTCATCACCGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCATCTTTACAAGGCATTCCAATATTTTGATAAAGACAGCAGTGGGTTTATTACAAGAGATGAACTGGAAACAGCCATGAAAGAATATGGTATGGGAGATGATGCTACAATCAAGGAAATTATATCTGAAGTTGATACAATTATATCTGAAGTTGACACAGATCATGATGGTAGAATCAACTATGAAGAATTCTGTGCAATGATGAGGAGTGGAAACCAACAACAAGTTAAGCTATTCTAA 1617 0.3779 MGCLLSKDKDSEPEHNNGYRYAHEHNHRNNHEQVNTSRTAPTSSYQPQIPTKPSSISAPSPKPLIKQDTNTILGKGLEDVKQFYTLGKELGRGQFGVTFLCTENSTGLLYACKSISKRKLVSKSDREDIKREIHIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSEKAAASICRQIVNVVNICHFMGVMHRDLKPENFLLASKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESEPWPKISDSAKDLVRKMLIQEPKKRITAAQVLEHPWIKDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSEEEIRGLKAMFTNMDTDNSGTITYEELKAGLQRLGSKLSEAEVKQLMEAADVDGNGTIDCIEFITATMHRHKLERDDHLYKAFQYFDKDSSGFITRDELETAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQQQVKLF 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04585 538 FunFam calcium-dependent protein kinase 1 170 349 - -
Mepo3g04585 538 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Mepo3g04585 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mepo3g04585 538 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Mepo3g04585 538 FunFam Calcium-dependent protein kinase 1 86 169 - -
Mepo3g04585 538 SUPERFAMILY Protein kinase-like (PK-like) 83 362 IPR011009 -
Mepo3g04585 538 MobiDBLite consensus disorder prediction 33 65 - -
Mepo3g04585 538 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04585 538 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Mepo3g04585 538 MobiDBLite consensus disorder prediction 7 32 - -
Mepo3g04585 538 CDD EFh 463 528 IPR002048 GO:0005509
Mepo3g04585 538 Pfam Protein kinase domain 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04585 538 Coils Coil 406 426 - -
Mepo3g04585 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 78 523 - -
Mepo3g04585 538 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Mepo3g04585 538 SMART efh_1 502 530 IPR002048 GO:0005509
Mepo3g04585 538 SMART efh_1 424 452 IPR002048 GO:0005509
Mepo3g04585 538 SMART efh_1 460 488 IPR002048 GO:0005509
Mepo3g04585 538 SMART efh_1 388 416 IPR002048 GO:0005509
Mepo3g04585 538 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04585 538 Gene3D Phosphorylase Kinase; domain 1 86 169 - -
Mepo3g04585 538 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Mepo3g04585 538 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Mepo3g04585 538 Gene3D - 350 534 - -
Mepo3g04585 538 FunFam Calcium-dependent protein kinase 1 349 531 - -
Mepo3g04585 538 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Mepo3g04585 538 CDD STKc_CAMK 83 341 - -
Mepo3g04585 538 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Mepo3g04585 538 Pfam EF-hand domain pair 459 528 IPR002048 GO:0005509
Mepo3g04585 538 SUPERFAMILY EF-hand 365 529 IPR011992 -
Mepo3g04585 538 MobiDBLite consensus disorder prediction 1 65 - -
Mepo3g04585 538 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Mepo3g04585 538 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Mepo3g04585 538 Gene3D Transferase(Phosphotransferase) domain 1 170 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04585 Mepo-Chr3 56854794 56860029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04585 18 538 EF-hand Containing Proteins AT3G20410 73.224 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo3g04585 Pkinase 9.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04585 K13412 - gmx:547888 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04585 3 56854794 56860029 Mepo7g02579 7 37022276 37029828 PCT