Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04571 ATGGAGAACCATAATAAGGTGCTAATGCTAATGGTGTTTACTTTCTTCTTTTGCTTCATGGCCATGCCTACTTACTCTAAACATAAAACTCTTACTACTATTGCTTCAAATCAGTTTATGCAATACAGTGATACACTTGTTTCTGGAGCTGGAATGTTTGAAGCAGGATTTTTCAGCTTTGGAGATCCACGACACCAATACTTCGGTATATGGTACAAGAGCATATCCCCAAGGACTATTGTGTGGGTTGCCAATAGAAATACCCCTGTAAAAAACTCAACAGCGATGCTGAAACTCAATGTTCAGGGAACTCTTGTTATTGTTGATGGCTCCAAAGGCATTATCTGGTCCTCCAATTCATCAAGAATTGTGGGAAAATCAGTAGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTAAAAGTTGCAAATAGCAGCAGCAAGAATGATGAGTTTTTGTGGGAAAGCTTTGATTATCCTGGTGACACATTGCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTGACTGGTCCGTATAGATATCTCACTTCTTGGAGAACCTCTAAAGATCCTGCTGTAGGTGAGTTTTCGTATAGGATCGATACTCATGGTTTTCCTCAACAGGTTATTGCAAAGGGAACAACAATTATGTATAGAGGAGGGTCATGGAATGGATATGATTTTTGGGAAAGAATTCATAGGGTCTTGAATTACTTATTTGTGATCACCGACAAAGAAGTCACTTTTCAATATCAAACGTGGAACCGTTTCATTATTACTAGATTTGTGCTAGATACATATGGAACTCCACAACGTTTTATATGGTCGGATTGGACACAAAATTGGGAGCCTACAGCTACTCGTCCTATAGACCAGTGTGAAGAGTATGCCTGGTGTGGTATCAACTCTAACTGCAATATTAATGAATCTCCAATATGCGAATGCTTGGAAGGTTTCGCGCCAAAATTTCAATCAAAATGGAAGTCATCGGATTGGTCTGGCGGGTGTCTGAGGAGAACAAAATTGAATTGTCTCAATGGAGATGGCTTTTTGAAGTACACAAACATGAAGTTGCCAGACACGTCGGCATCTTGGTATAACAAGAGCTTGAGCCTTGAGGAATGTAAGACGACGTGTTTGAAAAATTGTACTTGCACTGCATATGCAAATTTAGATATCAAAGATGGTTGGAGTGGTTGCTTACTTTGGTTTGACAATATTTTGGACATGAGAAAACATCGAGACCGAGGACAAGACATTTATATACGGCTAGCATCTTCAGAACTTGATCGTAAAAAGAATAAGAGGAACTTGAAGCTTTTTGGGACTTTTGCCGGGGTTATTGCATTCATTATAGGACTAACCGTTCTCCTATTGGTCACGTCAGCATATAGAAAGAAGCTTGGCCATATAAAAAAGTTATTTCACTGGAAGCAGAAGAAGGAGACGGAAGATGGTGACTTGGCAACAATATTTGATTTTTCAACCATCACTAATGCAACAAATAACTTCTCTATCAGAAACAAATTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATACTGGTAGATGGCCAAGAGATCGCTGTTAAGAGGCTTTCTAAAACATCGGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGACGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGATGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTGCTTTATTTTTGATGCTACGCGAAGCAAGTTACTTGATTGGACTAAACGTTTGGAAATTATTAATGGTATTGCTCGGGGGCTGTTGTATCTCCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAGACAAGCAACATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATAGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACCTATGGATATATGCCTCCGGAATATGCCGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTGCTTGAAATAATTAGCGGCAGGAAGAATCGCGGATTTTGTGACCCTCTACATCATCTAAACCTCCTTGGTTATGCATGGAGACTATGGATTGAAGAAAGGCCAAAGGAGTTAATAGCTGACATACCATATGATGAGGCCATATGTTCAGAAATAATAAGATTTATTCATGTGGGTTTATTGTGTGTACAACAGAAAGCAAACAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTGAAGGGTGAGAAGTTACTCCCAACACCAAGTGAACCTGGGTTCTATGAAGGAAGAGATAATAATACAATCAGCACAGCTTCTTCTTCAAAAGTGTGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAGGCCCGATAG 2460 0.3894 MENHNKVLMLMVFTFFFCFMAMPTYSKHKTLTTIASNQFMQYSDTLVSGAGMFEAGFFSFGDPRHQYFGIWYKSISPRTIVWVANRNTPVKNSTAMLKLNVQGTLVIVDGSKGIIWSSNSSRIVGKSVVQLLDSGNLVVKVANSSSKNDEFLWESFDYPGDTLLAGMKLKSNLVTGPYRYLTSWRTSKDPAVGEFSYRIDTHGFPQQVIAKGTTIMYRGGSWNGYDFWERIHRVLNYLFVITDKEVTFQYQTWNRFIITRFVLDTYGTPQRFIWSDWTQNWEPTATRPIDQCEEYAWCGINSNCNINESPICECLEGFAPKFQSKWKSSDWSGGCLRRTKLNCLNGDGFLKYTNMKLPDTSASWYNKSLSLEECKTTCLKNCTCTAYANLDIKDGWSGCLLWFDNILDMRKHRDRGQDIYIRLASSELDRKKNKRNLKLFGTFAGVIAFIIGLTVLLLVTSAYRKKLGHIKKLFHWKQKKETEDGDLATIFDFSTITNATNNFSIRNKLGEGGFGPVYKGILVDGQEIAVKRLSKTSGQGIEEFKNEVKLTATLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDCFIFDATRSKLLDWTKRLEIINGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLARSFIGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFCDPLHHLNLLGYAWRLWIEERPKELIADIPYDEAICSEIIRFIHVGLLCVQQKANNRPNMSSVVFMLKGEKLLPTPSEPGFYEGRDNNTISTASSSKVCSINEASISLLEAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04571 819 CDD B_lectin 45 159 IPR001480 -
Mepo3g04571 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Mepo3g04571 819 Gene3D Hepatocyte Growth Factor 340 422 - -
Mepo3g04571 819 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Mepo3g04571 819 Pfam S-locus glycoprotein domain 217 322 IPR000858 GO:0048544
Mepo3g04571 819 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04571 819 CDD STKc_IRAK 509 776 - -
Mepo3g04571 819 Pfam PAN-like domain 343 409 IPR003609 -
Mepo3g04571 819 CDD PAN_AP_plant 339 424 - -
Mepo3g04571 819 PIRSF SRK 3 819 IPR024171 GO:0004674
Mepo3g04571 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 423 - -
Mepo3g04571 819 SMART blect_4 37 159 IPR001480 -
Mepo3g04571 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Mepo3g04571 819 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Mepo3g04571 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 765 - -
Mepo3g04571 819 SMART serkin_6 503 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04571 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 190 IPR036426 -
Mepo3g04571 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mepo3g04571 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Mepo3g04571 819 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Mepo3g04571 819 ProSiteProfiles Bulb-type lectin domain profile. 31 152 IPR001480 -
Mepo3g04571 819 Gene3D - 26 156 IPR036426 -
Mepo3g04571 819 SMART ntp_6 344 423 IPR003609 -
Mepo3g04571 819 SUPERFAMILY Protein kinase-like (PK-like) 487 774 IPR011009 -
Mepo3g04571 819 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672|GO:0006468
Mepo3g04571 819 Pfam D-mannose binding lectin 79 185 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04571 Mepo-Chr3 56660780 56664391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04571 475 819 Receptor kinase-like Gene Family AT3G45860 52.925 3.92e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g04571 PK_Tyr_Ser-Thr 9.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04571 - - tpra:123915365 1266.91