Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04565 ATGAGTGTGGTAGGGTTTGACATTGGTAATGAGAACTGTGTTATTGCTGTGGCAAAGCATCGTGGGATTGATGTTTTGTTGAATGATGAATCGAAACGGGAAACCCCTGCTGTCGTCTGCTTTGGCGAGAAGCAGCGGTTTTTAGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACCCAAAGTCAACCATATCGCAAGTGAAGAGATTTATAGGCAGGAAATTTCTGGATCCTGATATGGAAAAGGATCTGAAAATGCTCCCTCTTGAAACTTCTGAAGGGCCGGATGGCGGCGTTTTGTTTCATTTGAAATACTTGGATGGGATTCATACGTTTACTCCAATTCAAATAATGTCTATGCTCTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGAGGCCCCCATCTCGGATTGTGTTATTGGTATCCCATCATATTTCACTGACTTGCAGAGACGGGCATATCTTGATGCGGCAAAAATTGCTGGGTTGAAGCCTTTGAGACTGATACATGACTGTACTGCAACTGCCCTTAGTTATGGAATTTACAAAACAAATTTTCACAGTGATGGTTCAAGTTATGTTGCATTTATTGACATTGGTCAATGCGATACTCAGGTCTGCATTGCAGCGTTTGAGTTTGGGCAAATGAAGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGGGACTTTGACGAGGTTCTATTTACTCATTTTGCTGAAAAGTTCAAGGAGCAGTACAGCATCAATGTGTATTCTAATGCCAAGGCATGCATTAGGCTGCGTGCAGCATGTGAGAAATTGAAGAAAGTATTGAGTGCAAATCCAGAGGCACCGCTAAATATTGAGTGTCTGATGGATGAGAAAGATGTCAAGGGTTTTATAACAAGGGAAGAATTTGAGAATCTTGCATCGGGATTATTAGAGAGAATTTCTATACCTTGCAACAACGCATTAGTTGAAGCGCGCTTGGATGCAGATAAGATTTCTTCTGTGGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCAGTAAGTACATTATTATCTTCTTTATTCAAGAGAGAACCAAGCCGAAAGTTGAATGCAAGTGAGTGTGTAGCTCGCGGTTGTGCTCTACAGTGTGCTATGCTCAGTCCCACATACCGTGTGCGTGACTATGAGGTCCAGGATATTAGTCCTTTTTCATATGGACTTGAATCAGATAAAGTTCGAATTTCTGATCGACCAGATGGTGTACTTTTCCCAAAAGGCCATCCCATTCCAAGTACTGTGGTCTTCCAATTCAAGCCAACTGATTTGTCCCATTTGGAAGCTTTCTACGTAAATGAACATGAACTACCACCTGGAACGTTTCCAAAAATTAGTTCCTTCACGATCGGTCCTATGCTTGGATCTCAAGGTAGTAAGGCAAAAGTTAAAGTTCGAGTTCAACTAAATCTGCATGGCATTTTCAGTATTGATTCAGCTACATTGATCAAGGATCACACGGATGATCATCATTCAAATTTTGATGCAATGGATGTTGATCCTAAGTCCGAGACCTCAGATAGTACCAATTCTGTTGCCAATGGCGCTGAAGATAGTACCAATAAGCGTGATTCTCCACAAAGTTATGCAGATTGTCTAAGAAAAGATAAGGCGAACAGAAGGATTCCTATTGCAGTGAATAAGAATATCTATGGTGGAATGACAATGGAAAAGATTTCTGAAGCCCATGAAAAAGAACTCCAGTTAGCTCAACAGGACAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACCTTGGAGTCCTATGTCTATGAGACGAGGAGTAAGCTCTTCAACACATATCGGAGCTTTGCTAGTGACCAAGAGAGGGATGTCATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTATGAAGACGGTGATGATGAAACTGAACACGCTTATACCTCAAAACTAGAAGTTCTGAAAAAGCTGGTGGATCGAATTGAGATTCGGTACAGAGATGATGAAGAAAGAACACTAGCTATAAAAGATTTATCAACATTCATTTCAGAGATTCGCAAGTTTGCAGATTCCGTTCCACCCCAGGATAAAGAACAGATCATCAATATGAGCAACAAAGCTGAGCATTGGCTAACAGAGAAGGTGCAACAACAAGATTCTTATCCTAAGAATATTGACCCAATATTATGGTCAAGTGATATCAGGAGCGTAATAAAGGATCTAAACGTAGGAATGCACAACATAGTGAAATCCAGGACAACTTCAGAAGACGAAGAGGACAAAGAGAAGACAGACGACGAAGATGACAAAGACAAGATGGATTCTTCCAATCATTCGTGA 2343 0.4131 MSVVGFDIGNENCVIAVAKHRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSTISQVKRFIGRKFLDPDMEKDLKMLPLETSEGPDGGVLFHLKYLDGIHTFTPIQIMSMLFAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGIYKTNFHSDGSSYVAFIDIGQCDTQVCIAAFEFGQMKILSHAFDRSLGGRDFDEVLFTHFAEKFKEQYSINVYSNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFENLASGLLERISIPCNNALVEARLDADKISSVELVGSGSRIPAVSTLLSSLFKREPSRKLNASECVARGCALQCAMLSPTYRVRDYEVQDISPFSYGLESDKVRISDRPDGVLFPKGHPIPSTVVFQFKPTDLSHLEAFYVNEHELPPGTFPKISSFTIGPMLGSQGSKAKVKVRVQLNLHGIFSIDSATLIKDHTDDHHSNFDAMDVDPKSETSDSTNSVANGAEDSTNKRDSPQSYADCLRKDKANRRIPIAVNKNIYGGMTMEKISEAHEKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRSFASDQERDVISRSLQETEDWLYEDGDDETEHAYTSKLEVLKKLVDRIEIRYRDDEERTLAIKDLSTFISEIRKFADSVPPQDKEQIINMSNKAEHWLTEKVQQQDSYPKNIDPILWSSDIRSVIKDLNVGMHNIVKSRTTSEDEEDKEKTDDEDDKDKMDSSNHS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04565 780 Coils Coil 652 672 - -
Mepo3g04565 780 Gene3D Actin; Chain A, domain 4 230 313 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 332 348 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 388 407 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 2 15 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 140 160 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 30 42 - -
Mepo3g04565 780 PRINTS 70kDa heat shock protein signature 363 383 - -
Mepo3g04565 780 FunFam Heat shock 70 kDa protein 4 1 72 - -
Mepo3g04565 780 MobiDBLite consensus disorder prediction 505 540 - -
Mepo3g04565 780 Gene3D - 38 113 - -
Mepo3g04565 780 MobiDBLite consensus disorder prediction 748 780 - -
Mepo3g04565 780 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 664 IPR029048 -
Mepo3g04565 780 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Mepo3g04565 780 FunFam Heat shock 70 kDa protein 4 38 113 - -
Mepo3g04565 780 FunFam Heat shock 70 kDa protein 4 114 192 - -
Mepo3g04565 780 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 541 IPR029047 -
Mepo3g04565 780 Gene3D - 186 360 - -
Mepo3g04565 780 Gene3D - 566 677 IPR029048 -
Mepo3g04565 780 MobiDBLite consensus disorder prediction 515 539 - -
Mepo3g04565 780 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 599 IPR029047 -
Mepo3g04565 780 Pfam Hsp70 protein 3 665 IPR013126 GO:0005524|GO:0140662
Mepo3g04565 780 CDD HSPA4_like_NDB 2 381 - -
Mepo3g04565 780 FunFam Heat shock 70 kDa protein 4 566 676 - -
Mepo3g04565 780 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Mepo3g04565 780 PANTHER HSC70CB, ISOFORM G-RELATED 1 768 - -
Mepo3g04565 780 FunFam Heat shock 70 kDa protein 4 230 313 - -
Mepo3g04565 780 Gene3D - 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04565 Mepo-Chr3 56566084 56575326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04565 4 636 Calmodulin-binding Proteins AT1G16030 27.316 4.49e-74 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04565 K09489 - gmx:100808218 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04565 3 56566084 56575326 Mepo3g04565 3 56566084 56575326 ECH