Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04548 ATGCAACCTAACCTAATTTCATCTCAATCGCTTCCGTCTCCGCCGAGTCCAGTTTCCGCCGTCATTCTACTCCATCGATCTCCACCGCTTTACTCCTCCATCACAGATCTGAACTTTAGACGAACATCTCCTGTACCAGCCGCCACTTCGTCTCCTCCGGCAACGAGGATCTTCTACACTGGGTATATGGAAGTCATTTCGATGAGATCAGTGTCTACAGTGGTTAGTTCTGCACTTTTGCTCTCGGTGGTTTCACTCGTGCTCAGGAATAAGATAAACTTGAATGAGATATCACATGACACTACCATGGGCCTCATTGATAGGGTGCTCAAAATGGGAGTGCTTCTAACTGAGGTTTGTATTGATACAGTTGGAGATCTAGGGAAATATGAAGCGAAGCTGTCTGATCAGTGCATTTTTAATGGCATAACTGGAGCTACGTTTATCGGTTTGAAGCCCGCGACCATGCGTTGGAAAGCTAAGAGAAAATGCTACAACTTTCATGTTGAGGACAGAACCCAGAACTTTGGCCCTGGATATACTGAAGATCCTGCAACCGAGTCTTGGCTAGAAGATCACAAACATTCTATCTTTGGTTTTCCAACATTGGTCGAGTTTAGTTGGGGAACTTGCAGCAGGTGGCACTGA 648 0.4583 MQPNLISSQSLPSPPSPVSAVILLHRSPPLYSSITDLNFRRTSPVPAATSSPPATRIFYTGYMEVISMRSVSTVVSSALLLSVVSLVLRNKINLNEISHDTTMGLIDRVLKMGVLLTEVCIDTVGDLGKYEAKLSDQCIFNGITGATFIGLKPATMRWKAKRKCYNFHVEDRTQNFGPGYTEDPATESWLEDHKHSIFGFPTLVEFSWGTCSRWH 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04548 215 FunFam Ribonuclease 172 215 - -
Mepo3g04548 215 PANTHER RIBONUCLEASE H2 SUBUNIT A 88 213 IPR001352 GO:0003723|GO:0004523
Mepo3g04548 215 Gene3D - 61 165 IPR036397 GO:0003676
Mepo3g04548 215 Pfam Ribonuclease HII 73 211 IPR024567 GO:0004523
Mepo3g04548 215 Gene3D Ribonuclease hii. Domain 2 170 215 IPR023160 GO:0004523
Mepo3g04548 215 SUPERFAMILY Ribonuclease H-like 89 214 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04548 Mepo-Chr3 56219708 56222348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04548 105 212 Core DNA Replication Machinery Family AT2G25100 42.975 7.36e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04548 K10743 - gmx:100779875 139.813