Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04492 ATGATTTCATCATTGAGACAACCTAGTATTGTGATCACTGGTTCTGATGCTGGTTTAGGGAAAAGACATGCAACCCTAGTTCAACCACAATCTTTTTTACCATCTTTGGTTGGTGGAAAATCACAAAGATCTGTAATTTCAATGAAAAAGCCTCTTCATCTTGCATGTGCTGGTGTTGGAAATTTTGGGTCAGTGAAGAATTTTGAATCAGAGAAGAGTTTTGAAAAGGGTGATTTGGTGAAGTGTGAAGCTTATGAAGCTGATAGATCAGAGGTTGAAGCTGCAGGAACACCATCAGAGGCTGCAAAGAAAGTGAAAATTGGGATATATTTTGCAACTTGGTGGGCTTTGAATGTTGTGTTTAATATTTATAACAAGAAGGTTTTGAATGCTTACCCTTACCCTTGGCTTACATCAACTCTCTCACTTGCTTGTGGCTCTCTTATGATGTTGATCTCTTGGGCCACTAGGATAGCTGAAGCTCCTAAGACTGATCTTGAATTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACACACAATTGGACATGTCGCGGCTACGGTTAGTATGTCCAAAGTTGCTGTATCGTTTACACATATCATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCGAGATTTATCTTGGGTGAAACCTTCCCCGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGCAACATCTTCTCGAAAAAGGGGATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCTGTGGAAGGACCAGCAATGTGGGCTGCTGGATATAAAACAGCTCTCGCTGAAATTGGACCCCAATTCTTATGGTGGGTAGCAGCTCAGAGTATATTCTATCATCTATACAATCAGGTGTCTTACATGTCGTTGGATGAGATCTCTCCCCTAACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTATCTTCAATTATCATCTTCCATACACCAATTCAGCCCGTCAATGCTCTTGGAGCCGCAATTGCTGTCTTCGGAACCTTCTTATACTCTCAGGTACTTTCTTATCAATTTTTATTTGATATTATGTAG 1221 0.4029 MISSLRQPSIVITGSDAGLGKRHATLVQPQSFLPSLVGGKSQRSVISMKKPLHLACAGVGNFGSVKNFESEKSFEKGDLVKCEAYEADRSEVEAAGTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPAMWAAGYKTALAEIGPQFLWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPIQPVNALGAAIAVFGTFLYSQVLSYQFLFDIM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04492 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
Mepo3g04492 406 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Mepo3g04492 406 PANTHER SOLUTE CARRIER FAMILY 35 106 396 - -
Mepo3g04492 406 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 396 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04492 Mepo-Chr3 55391727 55397485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04492 6 395 Antiporters AT5G54800 75.315 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04492 K15283 - gmx:732659 661.373