Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04480 ATGCCAACCTTGATGGCAAACTATCCATTTTTGTTTATGGAAACTCCGATCTCATCCCTAGTAAGGTTCAACATCCTTCTTTCTGCACCTTCACCGGTTGATGCATCCCCCACCGCCGCTGCCAATATAATTTGGCATTGGCCCACACTCATTTCTCGTGGGAGACCCCTTAACGCTATTGAACAGATGACTATGGAAAATGCAAATACAAATATCTCAGTTTGGTGGGACGTTGGAAATTGTCAAATTCCAACAAACTTTGACAGTATTGACTGCATTGCTAAAAATATTCGCTTAGCTCTCTTAAACGCCAACCTTCATGGCAAACTATCCATTTCTGCTTATGGAAACACAAATCTCATCGCTAGTGGGGTTCAACATGCACTTTCCACCGCAGGCATCCCCCTATGTCACGTCCCCACTGGAGATGTGTACAAAGACATCATGTTTGATATGTTAAACGATGATAGTTTCTCAAGACTTCTTTATGATCTTTCTGTAAAAAGGTATAACATTCTTCTTTCTGCACCTTCAAAAGTTGGAGCATCACTCACCTCCACTGCCAATGTCATTTGGCTCTGGTCAACACTCATTTATGGTGGGAGTCCTCTAAACACTACTGAACAGTTGTCTACATCATTGCTAGACCAAGTCCAGGACGGGGAAAGCAACATCATCTAG 681 0.4273 MPTLMANYPFLFMETPISSLVRFNILLSAPSPVDASPTAAANIIWHWPTLISRGRPLNAIEQMTMENANTNISVWWDVGNCQIPTNFDSIDCIAKNIRLALLNANLHGKLSISAYGNTNLIASGVQHALSTAGIPLCHVPTGDVYKDIMFDMLNDDSFSRLLYDLSVKRYNILLSAPSKVGASLTSTANVIWLWSTLIYGGSPLNTTEQLSTSLLDQVQDGESNII 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04480 226 PANTHER LIMKAIN B LKAP 62 198 IPR024768 GO:0005777|GO:0010468
Mepo3g04480 226 Pfam NYN domain 72 153 IPR021139 GO:0004540
Mepo3g04480 226 CDD PIN_limkain_b1_N_like 71 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04480 Mepo-Chr3 55302214 55303588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04480 73 215 C2H2 Transcription Factor Family AT5G61190 41.358 5.21e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04480 - - mtr:120579562 337.035