Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04465 ATGGCAACTGAAGAGAATAATGTTGCAAAGGCTGAAGAATTTAAAGTCCTTGCTAATGAAGCATTCAAAGAACGGAAGTTTGCCCATGCAATTGATCTATATACACAAGCAATTGAGCTAAATGGTCAAAATGCAGTTTACCTTGCTAATCGTGCCTTTGCCCATCTTCGGCTTGAGGAATATGGTAGTGCAATACTAGATGCTACAAAGGCTATCGAAGTTGATCCTAAATATTCAAAGGGTTACTACAGGCGAGGTGCTGCTCATCTTGGGCTGGGAAAATTCAAGGAAGCATTGAAAGATTTTCAGCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCTGTTATGAAACTGAAATTTGAAGAAGCTATTTCTGTACCAGGATCCGTGAAGCGTCCAATAGCTGAATCCATAGATTTCCGTTCAATAGGAAAGCGCCGCAATTCTTCGGTGCCAACCGAAGTTGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGTGGTGGTCATGTTGGTCAGGACATCAAAGACCACAATAGTAGCTACAATTGTGGTTGGTCTGCTGTTGGTCCTTGGGGCATGGTGGAGTAGCTGCAATACTGGTACATTTAGGAGTCATTTACAAGACCTAGATGTCGAGCCACAGTATTCAGGAGCAAGAATAGAAGGGGATACTATTACTTTGGATTTCGTAAAGAATATGATGGATGATTTCAAGAAACAGAAGGACTTGCATAAACGGTATGCATTCCAGATTGTGTTGCAAACAAAAGAGATGTTGCAAGCTTTGCCTTCTCTTGTCGACGTAACTGTTTCTCATGGAAAACATTTTACTGTTTGTGGCGATGTGCATGGTCAGTTTTATGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGAAACATTTGTGGAACTATTTGCAGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGAGAAAGTTTTCGTAGTCCATGGGGGTCTTTTTAGTGTTGACGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCACAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTTGGTGGGGATGTTACAAAAAGGTTTTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTTAAACCAATGGCTTATGCAAACAACTTCCTCAGAATGTTCTCATAA 1650 0.4115 MATEENNVAKAEEFKVLANEAFKERKFAHAIDLYTQAIELNGQNAVYLANRAFAHLRLEEYGSAILDATKAIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISVPGSVKRPIAESIDFRSIGKRRNSSVPTEVAIAAVTVAVMAVVVMLVRTSKTTIVATIVVGLLLVLGAWWSSCNTGTFRSHLQDLDVEPQYSGARIEGDTITLDFVKNMMDDFKKQKDLHKRYAFQIVLQTKEMLQALPSLVDVTVSHGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04465 549 FunFam Serine/threonine-protein phosphatase 5 1 138 - -
Mepo3g04465 549 SUPERFAMILY Metallo-dependent phosphatases 235 543 IPR029052 -
Mepo3g04465 549 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 542 - -
Mepo3g04465 549 Pfam PPP5 TPR repeat region 217 279 IPR013235 -
Mepo3g04465 549 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Mepo3g04465 549 PIRSF PPPtase_5 1 549 - -
Mepo3g04465 549 FunFam Serine/threonine-protein phosphatase 5 210 548 - -
Mepo3g04465 549 Gene3D - 210 548 IPR029052 -
Mepo3g04465 549 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Mepo3g04465 549 Pfam Calcineurin-like phosphoesterase 287 481 IPR004843 GO:0016787
Mepo3g04465 549 SUPERFAMILY TPR-like 7 137 IPR011990 GO:0005515
Mepo3g04465 549 CDD MPP_PP5_C 227 542 IPR041753 -
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 287 314 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 470 490 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 350 374 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 384 410 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 414 441 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 492 508 IPR006186 GO:0016787
Mepo3g04465 549 PRINTS Serine/threonine phosphatase family signature 317 344 IPR006186 GO:0016787
Mepo3g04465 549 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Mepo3g04465 549 Gene3D Tetratricopeptide repeat domain 2 152 IPR011990 GO:0005515
Mepo3g04465 549 SMART tpr_5 11 44 IPR019734 GO:0005515
Mepo3g04465 549 SMART tpr_5 45 78 IPR019734 GO:0005515
Mepo3g04465 549 SMART tpr_5 79 112 IPR019734 GO:0005515
Mepo3g04465 549 SMART pp2a_7 255 531 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04465 Mepo-Chr3 55086956 55095980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04465 290 471 Calmodulin-binding Proteins AT5G63870 37.963 3.35e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04465 K04460 - gmx:100820099 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04465 3 55086956 55095980 Mepo3g04465 3 55086956 55095980 ECH