Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04464 ATGTCTTCATCAAATTCACCATGTGCAGCATGCAAGTTTCTCAGACGAAAGTGCACTCAAGAATGTGATTTCGCTCCTTACTTTCTCCCTGAAAATCCACAGCGATTCGCGAATGTTCACCGTGTCTTCGGTGCAAGCAACGTCGCTAAGCTATTGAAAGAGCTTGACGTGAACGACCGTGAAGACGCGGTGAAATCTTTGGCATACGAGGCAGAGTCTCGTATAAAAGACCCTGTCTATGGATGTGTAGGTCTCATCTCATTTCTCCAACAGAAGTTAAGAGAAACTCAAAATGAACTCACTGTGGCGAAAAAAGAACTCGCCGGTTATAATTTGAATCCTCAAACCATGCAGTGCTTATTGATGAATTCTGGAACAGTTTTAATGCCTCAGCAGCAGCAGCAGCAACAACAATGGAATTCGCAGTTTCCGGGTTTTATGAATTACCCTAACAATTTTCCTCAAGAGATGGTTGGAGGAGGTGGACTAGTTATGCAGCAGCAACAAGAACATGAGCTTCAGATGGGTGGTGGATATCAAGTTACTCCACAAGAGTATTTGCTTAGGTCTGGTGCTGGATATCAGATGGGTGGTGGACATCAGATGGGTCCTGCTGGTGGTGGTGTTGCTGTTTCTGATCATGCTGATGTGGCTCATCCTTTGGTTATGGGAAATTTTGACAATGGTGCTAGTGGTGCTGCCGCCGCCGCCGGTGGGGGCTATTATCAGATTCAGCAGCAAGGAGGAGAGCAACAGCATAATTATCATGTTGGTGTTGCTCATGCTAATCCAGTTGAGGCACAGCTTTTGTTATCTCCACAGAATCAAGAAGCTGGTGAGGATGGTAAAAGTGTTGGTAGTGCTCATCGTTCAAGTTGA 879 0.4551 MSSSNSPCAACKFLRRKCTQECDFAPYFLPENPQRFANVHRVFGASNVAKLLKELDVNDREDAVKSLAYEAESRIKDPVYGCVGLISFLQQKLRETQNELTVAKKELAGYNLNPQTMQCLLMNSGTVLMPQQQQQQQQWNSQFPGFMNYPNNFPQEMVGGGGLVMQQQQEHELQMGGGYQVTPQEYLLRSGAGYQMGGGHQMGPAGGGVAVSDHADVAHPLVMGNFDNGASGAAAAAGGGYYQIQQQGGEQQHNYHVGVAHANPVEAQLLLSPQNQEAGEDGKSVGSAHRSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04464 292 MobiDBLite consensus disorder prediction 271 292 - -
Mepo3g04464 292 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mepo3g04464 292 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mepo3g04464 292 Coils Coil 86 113 - -
Mepo3g04464 292 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04464 Mepo-Chr3 55060122 55061000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04464 1 134 AS2 family AT5G66870 65.672 1.93e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g04464 LOB 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04464 - - psat:127080212 307.375