Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04440 ATGGGCGGAGTGGGAAAAACCACAGTGGTGAAAGAAGTCATCAAAACAATAGAAAAAAGTAAGCTATTTGATGAAGTTGCGATGACAGTGGTCTCCCAAGATATAAATTATGAGAAGATCCAAATACAAATTGCTGAGGATTTGGGCATGGAAATGAATAAGGTCAGCGAGAAAGGAAGAGCCAAGGACTTACTTCAAAGACTGATGAGTAAAGATAAAAAGATCCTAATTGTGCTAGATGATGATGTGTGGGGCATTCTTGATTTTGAGAATATTGGACTTCCTAAGAAATATTGCAAAATATTACTCACATCATGGAACCACATTCATATGAACTCCATGCAGTGGGCTACACTTATTGAGTTTGTTAAGCACTTGGGTCGAACTGGAAAGTGTAAGATTAAAGATACACCCAAGAGATGGTTCATTACATACATAGATAGAGATTCAGAAACCCTTTTCAAGGAAGAGATGAAGAATAAGAGAATAACAGCAGATATTGTAGTTGAAGAAAAGCAAGAGAAAGTCCAGAGTTCTGATCATGATCAGCCTTCACAAGTAAAGCTTCATAGGGAACTAAATGTAGAAGATGGAACTAAGGTAGGGGTTTTCTCTTGGATCATGTGCTAA 630 0.3746 MGGVGKTTVVKEVIKTIEKSKLFDEVAMTVVSQDINYEKIQIQIAEDLGMEMNKVSEKGRAKDLLQRLMSKDKKILIVLDDDVWGILDFENIGLPKKYCKILLTSWNHIHMNSMQWATLIEFVKHLGRTGKCKIKDTPKRWFITYIDRDSETLFKEEMKNKRITADIVVEEKQEKVQSSDHDQPSQVKLHRELNVEDGTKVGVFSWIMC 209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04440 209 Pfam NB-ARC domain 1 107 IPR002182 GO:0043531
Mepo3g04440 209 Pfam Domain of Kin17 curved DNA-binding protein 104 176 IPR019447 -
Mepo3g04440 209 Gene3D - 1 88 IPR027417 -
Mepo3g04440 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 125 IPR027417 -
Mepo3g04440 209 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 107 176 IPR037321 -
Mepo3g04440 209 Gene3D - 91 163 IPR038254 -
Mepo3g04440 209 SMART Kin17_mid_2 73 177 IPR019447 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo3g04440 Mepo-Chr3 54771034 54773447 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04440 107 175 C2H2 Transcription Factor Family AT1G55460 71.014 2.96e-32 119