Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04407 ATGCTCAGGCAGCAGCAGTTGCAGAAAACAATAAGGAAACAAGCTTGTGTCAATGCTCCTCCTGTTGTTGCTGATGGAGTTGCAGCAGTGGCTAGAAGAGTGGTGGTGGCCCCTAAACCTGTTCAGAAGAGAGTCACTGCAAAACCTAAACCTGCTGCATGTGGTTTGATTAACAAACCAAAGGAGATTGTTGACATTGATGCTGGTGATGCCAACAATGAGTTAGCTGCTGTTGAATATCTTGAAGACATATACAAGTTCTACAAGATAGTTGAGAATGAAAGCCGTCCACATGATTACATGGACTCACAACCTGAGATAAATGAGAGGATGAGAGGAATACTTATTGATTGGCTGGTAGATGTTCACTCAAAATTTGAACTTTCACCTGAAACCCTTTATCTCACAATCAACATAGTTGATAGGTTCCTAGCTGTCAACCTTGTATCAAGAAGGGAACTTCAATCGGTTGGAATCAGTGCCATGCTGATGGCATCAAAGTATGAAGAAATCTGGCCACCTGAGGTCAATGACTTTGTGTGCCTCTCAGATAGAGCTTACAGTCATGAGCAGATACTCATCATGGAGAAAACCATCCTAGGGAAGCTTGAATGGACTTTGACCGTGCCGACACCTTTTGATGGAATGTGCTAG 654 0.4312 MLRQQQLQKTIRKQACVNAPPVVADGVAAVARRVVVAPKPVQKRVTAKPKPAACGLINKPKEIVDIDAGDANNELAAVEYLEDIYKFYKIVENESRPHDYMDSQPEINERMRGILIDWLVDVHSKFELSPETLYLTINIVDRFLAVNLVSRRELQSVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPFDGMC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04407 217 FunFam G2/mitotic-specific cyclin 96 208 - -
Mepo3g04407 217 PANTHER CYCLINS 59 214 IPR039361 -
Mepo3g04407 217 PIRSF Cyclin_A_B_D_E 4 215 IPR046965 GO:0016538|GO:0044772
Mepo3g04407 217 Gene3D - 83 213 - -
Mepo3g04407 217 CDD CYCLIN_AtCycB-like_rpt1 63 205 - -
Mepo3g04407 217 Gene3D - 97 208 - -
Mepo3g04407 217 SUPERFAMILY Cyclin-like 72 207 IPR036915 -
Mepo3g04407 217 Pfam Cyclin, N-terminal domain 83 207 IPR006671 -
Mepo3g04407 217 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Mepo3g04407 217 SMART cyclin_7 117 201 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04407 Mepo-Chr3 54324287 54325226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04407 32 213 Core Cell Cycle Gene Families AT2G26760 63.187 1.15e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04407 K21777 - gmx:547919 290.041