Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04405 ATGTCTATTAAGCTGACGGAGAACGCTATTCCGGCGATAAACAACGGCGACGTTGATGCAAAACCGTTGGTTCAAATTCTCGGCATTACATTACTCGTAAGCAGCGACGACTCTCTGCTGCGAAAATATCATCTGAAACTTTCCGACGGAGTTTCTTCCCACCCCGCCACAATCGATGCACAACTCAACGACGGAGTCGGAACCGGACGAGTTAAGGAAGGTTCCATCGTTCAGCTTCTCGATTACTTTTGCCCTACTATCGTAACTAAAAAGATTATTATAGTGCATAACATGGAAACCATTGTCCTTGATTCTCAAATCATTGGGAATCCAAAGCCATTTGTGGATTCAGAATTACCAACTGTAGAAAATGAAGAAACAAGTGTAATACCTATAGCTGCTTTACATCCCTATAAGGATATGGATCTGTCATAG 435 0.4253 MSIKLTENAIPAINNGDVDAKPLVQILGITLLVSSDDSLLRKYHLKLSDGVSSHPATIDAQLNDGVGTGRVKEGSIVQLLDYFCPTIVTKKIIIVHNMETIVLDSQIIGNPKPFVDSELPTVENEETSVIPIAALHPYKDMDLS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04405 144 Gene3D - 3 115 IPR012340 -
Mepo3g04405 144 Pfam Replication factor-A protein 1, N-terminal domain 5 102 IPR007199 GO:0003677|GO:0005634|GO:0006260
Mepo3g04405 144 SUPERFAMILY Nucleic acid-binding proteins 1 110 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04405 Mepo-Chr3 54294698 54297135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04405 26 118 Core DNA Replication Machinery Family AT2G06510 43.011 1.28e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04405 K07466 - ccaj:109793065 140.584