Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04403 ATGTCTTCCAACGATTCTTTGAAAATGGAATTGTCGAAGAAGACTTCATTTTTGGGTTTGAGATTATGGGTTTTGATAGGAATAGGTGTTGGTGCATTTATAGTTCTGATTCTTTGTTTGTTATCTATATGGATAACGTTTCGGAGAAAAAAAACAAGGAGGTCCATAGACAAGTACTCGTTATCTCAAATACCGCATGTCTCGAAGGATATTAAAGTTGACAAGGTTGAAGTGCAACCTTCTAACGATCAAGTAGATAGTGTGTCTATTCATGTCCACGACAACATGGCAAGTGATAAGAATTCGGATAAGTTGTTTGTTCATTTGAGCAAATCCAGTGATCCTGATAATATCAGTCAGTGTAGTTCGATTTATCACCACGAGAGAGGATTAAGTTCAATGTCAGCAGATGATGGAAACTTTGGAACTGTTAAGAAGCAGTATATGGTAACTGCATCTCCTCTGGTTGGCTTGCCTGAAGGTTCTCATCTTGGATGGGGTCATTGGTTCACACTTAGAGATCTCGAACATTCGACTAACCGTTTCTCGGCTGAGAATGTGATTGGTGAGGGTGGATATGGAGTTGTTTATAAGGGAAGATTGATCAATGGATCTGAGGTGGCGGTGAAGAGACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTCGAGGCTATAGGTCATGTCAGACATAAAAATCTTGTGCGTTTGCTTGGATTTTGCGTAGAAGGTGTTCACAGGTTGCTTGTGTATGAGTATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGCAATGAGGCAACATGGAGTACTTACGTGGGAAGCTCGCATGAAAGTTATTCTCGGCACAGCGAAAGCGCTTGCTTATTTTCATGAAGCAATAGAACCAAAAGTTGTTCACCGTGATATAAAGTCGAGCAACATTTTAATTGATAGTGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTAGCCAAACTTTTGGATTCCGGAGAAAGTCACATAACCACCAGAGTAATGGGAACATTTGGTTACGTTGCACCAGAATATGCTAATACTGGCTTGTTAAACGAGAAGAGTGATATTTACAGCTTTGGTGTTCTCCTACTAGAAGCGATTACCGGAAGGGACCCTGTAGACTATACACGTCCTGCCAACGAGGTGAATCTTGTTGAGTGGCTGAAGATGATGGTGGGGTCAAGGAGAGCTGAGGAAGTTGTGGACTCTAGCCTTGAAGTGAAACCACCAACACGTGCTTTAAAGCGTGCCCTTCTTGTTGCATTTAGGTGTGTCGATCCTGATTCAGAAAAGAGACCTAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCGTTCAGAGAGGATCGAAGGAATAGAAAAAGCCGCACTGCCAGCATAGACATTGTTGAATCTCTGAAGGATATCTCTGGTCCTTCTGATACTGCTGATAAGACGAAAGGTTCTGAAGAATGCGCACCTGAGACAACTCAAGGGTAG 1521 0.4175 MSSNDSLKMELSKKTSFLGLRLWVLIGIGVGAFIVLILCLLSIWITFRRKKTRRSIDKYSLSQIPHVSKDIKVDKVEVQPSNDQVDSVSIHVHDNMASDKNSDKLFVHLSKSSDPDNISQCSSIYHHERGLSSMSADDGNFGTVKKQYMVTASPLVGLPEGSHLGWGHWFTLRDLEHSTNRFSAENVIGEGGYGVVYKGRLINGSEVAVKRLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGVHRLLVYEYVNNGNLEQWLHGAMRQHGVLTWEARMKVILGTAKALAYFHEAIEPKVVHRDIKSSNILIDSEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYTRPANEVNLVEWLKMMVGSRRAEEVVDSSLEVKPPTRALKRALLVAFRCVDPDSEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASIDIVESLKDISGPSDTADKTKGSEECAPETTQG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04403 506 Coils Coil 202 222 - -
Mepo3g04403 506 MobiDBLite consensus disorder prediction 460 506 - -
Mepo3g04403 506 SMART serkin_6 182 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04403 506 CDD STKc_IRAK 188 454 - -
Mepo3g04403 506 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04403 506 FunFam Putative receptor-like protein kinase 164 257 - -
Mepo3g04403 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Mepo3g04403 506 SUPERFAMILY Protein kinase-like (PK-like) 165 455 IPR011009 -
Mepo3g04403 506 PANTHER OS01G0323000 PROTEIN 1 473 - -
Mepo3g04403 506 Gene3D Phosphorylase Kinase; domain 1 164 257 - -
Mepo3g04403 506 Gene3D Transferase(Phosphotransferase) domain 1 258 472 - -
Mepo3g04403 506 Pfam Protein kinase domain 184 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04403 506 FunFam Putative receptor-like serine/threonine-protein kinase 258 468 - -
Mepo3g04403 506 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Mepo3g04403 506 MobiDBLite consensus disorder prediction 460 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04403 Mepo-Chr3 54279961 54284119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04403 19 456 Trihelix Transcription Factor Family AT1G70460 40.991 1.08e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mepo3g04403 Pkinase 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04403 - - gmx:100813931 835.484