Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04325 ATGGCTTATAGTGACTCTTGTCTCTGTATTTTCTTTGTCTCACTGCATTATTACTTCTTCACTTGCTTAGCTAACAAAAACATCACCACTGATGAATTTGCACTTCTTGCATTCAAATCCTCTATTACCTTAGACCCTTATCACATGCTTAGTAATTGGTCAATCTCCCCTACTTCTTCTTTCTCTTCATGCGATTGGGCTGGTGTCACTTGTGACGAGCATCATGGAAGGGTAAAGGCATTGAATCTTCGTAACATGGGTCTTGAAGGTACAATTTCCTCTCAATTGGGAAATCTCTCTTTCCTTGTTATTCTTGATCTACAAGGCAATAGTTTCCATGGTGAGTTGCCACAAGAGTTACTTCAGTTGCATAGACTGAAGAAATTGGACTTGAGCTACAATGATTTTGTTGGAGAAATCCCCGGAAGGATAGGGTACTTATCAAAACTTCAACACTTGGATCTTAGCGATAATAATATTGTTGGATTTATTCCTCAATCTATATCCAACTTGTCAATGTTAGAGTACCTGGATTTAAGATTAAATCGCATCAAAGGAGTCATACCAACAACAATTTCCAACATATCTACACTTGAAGAAATCCATTTAGCTGGAAACTCCTTATCAGGTGAAATTCCAAAAGAAATTGGTGATCTTACACACTTGACAATGTTGAACCTTCAATATAATCTACTCTTCGGCAACATAAAGTCAACATTAATGTTCAACAGCTCATCTTTGCAATATTTGGTGCTTGGTTTTAATAACCTGACTGGTATTCTTCCATCAAATATTTGTCAAGGGCTTCCAAATCTTAAATTACTCTATCTTTATCATAATGATTTTTCTGGTAAAATTCCAAATATTTGGCGTTATTGCAAAGAGTTGGAAGATTTAGAGCTATCCTACAATAATTTTGATAAAGGACGTATTCCATCTGAGATTGGAAACTTGACTAAGCTTCGGTATTTGTATCTTCATAGCAACAACTTGGAGGGTTTGATACCTATGGAGATTGGAAATCTCAATCAACTTCAGCTTCTGCAAATGGGAAATAACAGCTTGAGTGGACATGTTCCTTCAAAACTCTTCAACATTTCCACATTGGTAATTTTGCATCTTGAGCTAAATTCTCTCTCAGGCATGCTGCCATCCAATATGGGATTTGGCCTTCCTAATCTACAAGAGCTACACATGTACAAAAACAAATTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAGCCTCATCATACTTGATTTGAGTTGGAATAAATTTAGTGGAATTATACCTAACACTTTTGGAAATTTAAGATTCCTCAAATCACTCATTATAGGTGGCAATCCTAATTTGACATTAGCAGATAATTCTCTTGAATTCAATTTCCTCACTTCACTGACAAGTTGCACATATCTTACACATCTTGAAGTATCAGAGAATAGTTTACCATCAAACCTTCCCAAGTCCATTGGAAACTTATCTTTAGAAAACTTTTGGGCAAATTCTTGTGGAATTGGTGGAAATATTCCACTAGAAATTGGAAATATGAGCAAGCTGATTCGCTTATCTCTGAGTAAGAATGATCTAAATGGACCAATCCCTACTACAATTAAAGGGTTACATAAGCTTCAGTCTTTGAAACTTGACCAAAATGGACTGCAAGGATCCATCACCAATGAGGTTTGTGAACTTAGGAGTTTGAGTGAGTTGTACTTAACAAGCAACAAACTTTTTGGAAAGTTACCATCATGCTTGGGAAATATGAGTTCTCTTAGAAAGTTGTACATAGGATCTAATAGGTTAACCTCAGAGATACCTTCCTCCTTTTGGAATCTCAAAGATATTCTAGAGGTTTACTTATCCTCCAATGATTTAACTGGAAATCTTCCACTTGAGATTAGGAATTTGAGAGCTATTGTACTATTAGATTTATCAAGAAATCAATTTTCAAGCGACATTCCTACCGCCATCAGTTTCTTGAAAACTTTACAAATTCTCTCCTTAGAATCTAACAAATTGAAAGGGACTATCCCAACTTCAATTGGTGAAATGGTAGGCCTGAGCTTCTTGGACTTGTCTCAAAATCATATAACTGGTGTGATCCCAAAATCCTTAGAGTCACTTTCTTATCTTAAGTACATGAATTTGTCATACAATAGATTGCAAGGAGAGATTCCTGATGGAGGACCTTTCGAAAAATTTACAGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGAAGTGCTAGGTTAGAAGTACCTCTGTGTGATAAACATATTGGGAACAAGCCAGTGACAAAGATGTTATTAATCAAAATCTTGTTACCCATAATTGTGTTGGCCATTTTGGTTGTTCTATGCATAATTCTTCGAATGCATAAAAAGAGAAAAGTTGAAAATCCACTTGAAAGAGGTTTATCAACTGATTTAGGGGCTCCAAGAAGGATTTCATATCATGAACTTGTTCAAGCAACTAATGGATTTAGTGAGAGTAACTTACTTGGAAAGGGGGGCTTTGGCTCTGTGTATCAGGGAATGCTTTCTACTGGGACGATGGTAGCAATTAAAGTACTTGACTTGAATTTGGAAGCAACATCAAGAAGTTTCGACACAGAATGTAATGCAATGCGCATTCTTCGACATCGAAATCTTGTTGAGGTTATTACAAGTTGTTCAAATAAAGATTTCAAGTCATTGGTGATGGAGTTTATGTCAAATGGTAGTGTGGAAAAATGGTTATACTCGAATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGATGTTGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTACTAGATGAAAATATGGTTGCACATGTCGGTGATTTTGGAATTTCCAAGCTCTTGGATGAAGGACATTCTAAAATCCATACTGAGACTTTAGCTACTCTTGGCTATGTTGCACCAGAGTATGGATCTAAGGGAGTCATTTCTATTAAAGGAGATGTGTACAGCTATGGAATAATGCTAATGGAAATCTTCACAGGAAAGAAGCCAACAAATGAAATGTTTGTACAAGAATTAACCTTAAAAACATGGATTAGTGAGTCAATGCCTAATTCAGTCATGGAAGTTGTGGATTACAATTTAGTCTCACAACATGGGAATGAAACTCATGAAATTGTATCACATGTATCATCTATTTTGGATTTAGCATTGAGATGTTGTGCAGATTCACCAGAAGCAAGGATTAGTATGGCAGATGTAACTGCATCACTAATCAAAATTAAGATCTTATTCATTTAG 3333 0.3576 MAYSDSCLCIFFVSLHYYFFTCLANKNITTDEFALLAFKSSITLDPYHMLSNWSISPTSSFSSCDWAGVTCDEHHGRVKALNLRNMGLEGTISSQLGNLSFLVILDLQGNSFHGELPQELLQLHRLKKLDLSYNDFVGEIPGRIGYLSKLQHLDLSDNNIVGFIPQSISNLSMLEYLDLRLNRIKGVIPTTISNISTLEEIHLAGNSLSGEIPKEIGDLTHLTMLNLQYNLLFGNIKSTLMFNSSSLQYLVLGFNNLTGILPSNICQGLPNLKLLYLYHNDFSGKIPNIWRYCKELEDLELSYNNFDKGRIPSEIGNLTKLRYLYLHSNNLEGLIPMEIGNLNQLQLLQMGNNSLSGHVPSKLFNISTLVILHLELNSLSGMLPSNMGFGLPNLQELHMYKNKFVGKIPNSISNASSLIILDLSWNKFSGIIPNTFGNLRFLKSLIIGGNPNLTLADNSLEFNFLTSLTSCTYLTHLEVSENSLPSNLPKSIGNLSLENFWANSCGIGGNIPLEIGNMSKLIRLSLSKNDLNGPIPTTIKGLHKLQSLKLDQNGLQGSITNEVCELRSLSELYLTSNKLFGKLPSCLGNMSSLRKLYIGSNRLTSEIPSSFWNLKDILEVYLSSNDLTGNLPLEIRNLRAIVLLDLSRNQFSSDIPTAISFLKTLQILSLESNKLKGTIPTSIGEMVGLSFLDLSQNHITGVIPKSLESLSYLKYMNLSYNRLQGEIPDGGPFEKFTAQSFMHNEALCGSARLEVPLCDKHIGNKPVTKMLLIKILLPIIVLAILVVLCIILRMHKKRKVENPLERGLSTDLGAPRRISYHELVQATNGFSESNLLGKGGFGSVYQGMLSTGTMVAIKVLDLNLEATSRSFDTECNAMRILRHRNLVEVITSCSNKDFKSLVMEFMSNGSVEKWLYSNNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVGDFGISKLLDEGHSKIHTETLATLGYVAPEYGSKGVISIKGDVYSYGIMLMEIFTGKKPTNEMFVQELTLKTWISESMPNSVMEVVDYNLVSQHGNETHEIVSHVSSILDLALRCCADSPEARISMADVTASLIKIKILFI 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04325 1110 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 467 762 - -
Mepo3g04325 1110 SMART LRR_typ_2 147 170 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 638 662 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 99 123 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 391 415 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 416 438 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 342 366 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 590 613 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 318 341 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 269 292 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 171 194 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 245 268 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 542 566 IPR003591 -
Mepo3g04325 1110 SMART LRR_typ_2 686 709 IPR003591 -
Mepo3g04325 1110 SUPERFAMILY L domain-like 242 486 - -
Mepo3g04325 1110 PANTHER OS04G0122200 PROTEIN 335 1106 - -
Mepo3g04325 1110 ProSiteProfiles Protein kinase domain profile. 830 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04325 1110 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Mepo3g04325 1110 Gene3D Transferase(Phosphotransferase) domain 1 906 1107 - -
Mepo3g04325 1110 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 906 1110 - -
Mepo3g04325 1110 SUPERFAMILY L domain-like 30 306 - -
Mepo3g04325 1110 Gene3D Ribonuclease Inhibitor 450 762 IPR032675 -
Mepo3g04325 1110 Gene3D Ribonuclease Inhibitor 241 449 IPR032675 -
Mepo3g04325 1110 Gene3D Ribonuclease Inhibitor 187 240 IPR032675 -
Mepo3g04325 1110 Pfam Protein kinase domain 831 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04325 1110 FunFam Leucine-rich repeat receptor-like kinase 32 142 - -
Mepo3g04325 1110 SMART LRR_sd22_2 518 544 - -
Mepo3g04325 1110 SMART LRR_sd22_2 590 616 - -
Mepo3g04325 1110 SMART LRR_sd22_2 147 173 - -
Mepo3g04325 1110 SMART LRR_sd22_2 686 712 - -
Mepo3g04325 1110 SMART LRR_sd22_2 471 497 - -
Mepo3g04325 1110 SMART LRR_sd22_2 342 368 - -
Mepo3g04325 1110 SMART LRR_sd22_2 318 336 - -
Mepo3g04325 1110 SMART LRR_sd22_2 174 197 - -
Mepo3g04325 1110 FunFam Serine-threonine protein kinase plant-type 810 905 - -
Mepo3g04325 1110 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Mepo3g04325 1110 ProSitePatterns Protein kinases ATP-binding region signature. 836 858 IPR017441 GO:0005524
Mepo3g04325 1110 SUPERFAMILY Protein kinase-like (PK-like) 813 1103 IPR011009 -
Mepo3g04325 1110 Pfam Leucine Rich Repeat 417 439 IPR001611 GO:0005515
Mepo3g04325 1110 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515
Mepo3g04325 1110 SMART serkin_6 830 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04325 1110 SUPERFAMILY L domain-like 500 749 - -
Mepo3g04325 1110 Pfam Leucine rich repeat 174 232 IPR001611 GO:0005515
Mepo3g04325 1110 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Mepo3g04325 1110 Pfam Leucine rich repeat 567 627 IPR001611 GO:0005515
Mepo3g04325 1110 Pfam Leucine rich repeat 643 699 IPR001611 GO:0005515
Mepo3g04325 1110 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 234 464 - -
Mepo3g04325 1110 Gene3D Phosphorylase Kinase; domain 1 813 905 - -
Mepo3g04325 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 949 961 IPR008271 GO:0004672|GO:0006468
Mepo3g04325 1110 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 143 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04325 Mepo-Chr3 52598510 52608444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04325 11 1106 Receptor kinase-like Gene Family AT5G46330 35.026 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g04325 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04325 - K13420 mtr:25481440 1259.2